Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 LINC01521-201ENST00000504184 1943 ntBASIC20.4■□□□□ 0.86
LRRC58Q96CX6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
LRRC58Q96CX6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.4■□□□□ 0.86
LRRC58Q96CX6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC58Q96CX6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
LRRC58Q96CX6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.39■□□□□ 0.86
LRRC58Q96CX6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC58Q96CX6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
LRRC58Q96CX6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC58Q96CX6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.39■□□□□ 0.85
LRRC58Q96CX6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC58Q96CX6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LRRC58Q96CX6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.39■□□□□ 0.85
LRRC58Q96CX6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC58Q96CX6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
LRRC58Q96CX6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
LRRC58Q96CX6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC58Q96CX6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC58Q96CX6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC58Q96CX6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC58Q96CX6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC58Q96CX6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC58Q96CX6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC58Q96CX6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.38■□□□□ 0.85
LRRC58Q96CX6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC58Q96CX6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC58Q96CX6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC58Q96CX6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC58Q96CX6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC58Q96CX6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRC58Q96CX6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.38■□□□□ 0.85
LRRC58Q96CX6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.38■□□□□ 0.85
LRRC58Q96CX6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC58Q96CX6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC58Q96CX6 OR7E47P-201ENST00000546390 1422 ntBASIC20.37■□□□□ 0.85
LRRC58Q96CX6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC58Q96CX6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 KRT125P-201ENST00000546827 989 ntBASIC20.36■□□□□ 0.85
LRRC58Q96CX6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC58Q96CX6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC58Q96CX6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC58Q96CX6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC58Q96CX6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
LRRC58Q96CX6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC58Q96CX6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.35■□□□□ 0.85
LRRC58Q96CX6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.35■□□□□ 0.85
LRRC58Q96CX6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.35■□□□□ 0.85
LRRC58Q96CX6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC58Q96CX6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
LRRC58Q96CX6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.35■□□□□ 0.85
LRRC58Q96CX6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.35■□□□□ 0.85
LRRC58Q96CX6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC58Q96CX6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC58Q96CX6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC58Q96CX6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC58Q96CX6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
LRRC58Q96CX6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.34■□□□□ 0.85
LRRC58Q96CX6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LRRC58Q96CX6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.34■□□□□ 0.85
LRRC58Q96CX6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.34■□□□□ 0.85
LRRC58Q96CX6 Z92544.1-202ENST00000571933 1220 ntBASIC20.34■□□□□ 0.85
LRRC58Q96CX6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC58Q96CX6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms