Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE4Q96A23 AC080038.3-201ENST00000623346 1952 ntBASIC19.24■□□□□ 0.67
CPNE4Q96A23 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CPNE4Q96A23 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.24■□□□□ 0.67
CPNE4Q96A23 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE4Q96A23 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE4Q96A23 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE4Q96A23 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.24■□□□□ 0.67
CPNE4Q96A23 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE4Q96A23 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CPNE4Q96A23 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE4Q96A23 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CPNE4Q96A23 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE4Q96A23 TERF1P2-201ENST00000583350 1212 ntBASIC19.24■□□□□ 0.67
CPNE4Q96A23 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE4Q96A23 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE4Q96A23 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE4Q96A23 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE4Q96A23 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE4Q96A23 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE4Q96A23 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CPNE4Q96A23 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.24■□□□□ 0.67
CPNE4Q96A23 AC005224.4-201ENST00000583262 1652 ntBASIC19.24■□□□□ 0.67
CPNE4Q96A23 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE4Q96A23 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE4Q96A23 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE4Q96A23 AC242852.2-201ENST00000615738 1807 ntBASIC19.23■□□□□ 0.67
CPNE4Q96A23 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE4Q96A23 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.23■□□□□ 0.67
CPNE4Q96A23 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE4Q96A23 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE4Q96A23 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.23■□□□□ 0.67
CPNE4Q96A23 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CPNE4Q96A23 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE4Q96A23 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE4Q96A23 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.23■□□□□ 0.67
CPNE4Q96A23 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CPNE4Q96A23 AC034268.1-201ENST00000441047 882 ntBASIC19.23■□□□□ 0.67
CPNE4Q96A23 CCDC92B-201ENST00000575506 885 ntBASIC19.23■□□□□ 0.67
CPNE4Q96A23 AC087623.3-201ENST00000607047 1098 ntBASIC19.23■□□□□ 0.67
CPNE4Q96A23 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.23■□□□□ 0.67
CPNE4Q96A23 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.23■□□□□ 0.67
CPNE4Q96A23 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CPNE4Q96A23 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CPNE4Q96A23 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CPNE4Q96A23 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.23■□□□□ 0.67
CPNE4Q96A23 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE4Q96A23 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE4Q96A23 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CPNE4Q96A23 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE4Q96A23 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE4Q96A23 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE4Q96A23 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CPNE4Q96A23 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.22■□□□□ 0.67
CPNE4Q96A23 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.22■□□□□ 0.67
CPNE4Q96A23 KRT18P14-201ENST00000534205 1250 ntBASIC19.22■□□□□ 0.67
CPNE4Q96A23 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.22■□□□□ 0.67
CPNE4Q96A23 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.22■□□□□ 0.67
CPNE4Q96A23 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE4Q96A23 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.22■□□□□ 0.67
CPNE4Q96A23 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE4Q96A23 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE4Q96A23 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
CPNE4Q96A23 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE4Q96A23 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE4Q96A23 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE4Q96A23 GUSBP5-202ENST00000510805 1989 ntBASIC19.21■□□□□ 0.67
CPNE4Q96A23 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.21■□□□□ 0.67
CPNE4Q96A23 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE4Q96A23 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE4Q96A23 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE4Q96A23 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE4Q96A23 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.21■□□□□ 0.67
CPNE4Q96A23 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CPNE4Q96A23 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE4Q96A23 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.21■□□□□ 0.67
CPNE4Q96A23 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CPNE4Q96A23 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE4Q96A23 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE4Q96A23 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CPNE4Q96A23 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE4Q96A23 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE4Q96A23 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE4Q96A23 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CPNE4Q96A23 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CPNE4Q96A23 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE4Q96A23 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE4Q96A23 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE4Q96A23 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE4Q96A23 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE4Q96A23 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE4Q96A23 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CPNE4Q96A23 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE4Q96A23 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE4Q96A23 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE4Q96A23 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE4Q96A23 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE4Q96A23 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE4Q96A23 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE4Q96A23 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms