Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NPIPB3Q92617 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.91■□□□□ 0.3
NPIPB3Q92617 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPB3Q92617 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.91■□□□□ 0.3
NPIPB3Q92617 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.91■□□□□ 0.3
NPIPB3Q92617 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPB3Q92617 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.91■□□□□ 0.3
NPIPB3Q92617 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NPIPB3Q92617 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
NPIPB3Q92617 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPB3Q92617 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPB3Q92617 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
NPIPB3Q92617 AL024507.2-201ENST00000606070 2574 ntBASIC16.9■□□□□ 0.3
NPIPB3Q92617 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPB3Q92617 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPB3Q92617 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPB3Q92617 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NPIPB3Q92617 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPB3Q92617 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPB3Q92617 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPB3Q92617 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPB3Q92617 AC099791.2-201ENST00000605725 427 ntBASIC16.9■□□□□ 0.3
NPIPB3Q92617 Z98882.1-201ENST00000622160 2253 ntBASIC16.9■□□□□ 0.3
NPIPB3Q92617 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPB3Q92617 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NPIPB3Q92617 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPB3Q92617 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPB3Q92617 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPB3Q92617 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NPIPB3Q92617 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPB3Q92617 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPB3Q92617 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPB3Q92617 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.89■□□□□ 0.29
NPIPB3Q92617 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.89■□□□□ 0.29
NPIPB3Q92617 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.89■□□□□ 0.29
NPIPB3Q92617 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPB3Q92617 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.89■□□□□ 0.29
NPIPB3Q92617 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.89■□□□□ 0.29
NPIPB3Q92617 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.89■□□□□ 0.29
NPIPB3Q92617 OR7E47P-201ENST00000546390 1422 ntBASIC16.88■□□□□ 0.29
NPIPB3Q92617 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPB3Q92617 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPB3Q92617 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPB3Q92617 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.88■□□□□ 0.29
NPIPB3Q92617 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPB3Q92617 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPB3Q92617 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPB3Q92617 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.88■□□□□ 0.29
NPIPB3Q92617 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPB3Q92617 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.88■□□□□ 0.29
NPIPB3Q92617 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPB3Q92617 AL356740.2-201ENST00000601559 647 ntBASIC16.88■□□□□ 0.29
NPIPB3Q92617 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.88■□□□□ 0.29
NPIPB3Q92617 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPB3Q92617 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPB3Q92617 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPB3Q92617 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPB3Q92617 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPB3Q92617 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPB3Q92617 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPB3Q92617 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPB3Q92617 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPB3Q92617 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NPIPB3Q92617 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.87■□□□□ 0.29
NPIPB3Q92617 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.87■□□□□ 0.29
NPIPB3Q92617 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPB3Q92617 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPB3Q92617 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPB3Q92617 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPB3Q92617 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPB3Q92617 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPB3Q92617 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.86■□□□□ 0.29
NPIPB3Q92617 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPB3Q92617 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NPIPB3Q92617 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPB3Q92617 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPB3Q92617 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPB3Q92617 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPB3Q92617 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPB3Q92617 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPB3Q92617 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPB3Q92617 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPB3Q92617 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPB3Q92617 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPB3Q92617 AC026471.6-201ENST00000622954 1905 ntBASIC16.86■□□□□ 0.29
NPIPB3Q92617 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.86■□□□□ 0.29
NPIPB3Q92617 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPB3Q92617 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPB3Q92617 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
NPIPB3Q92617 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.85■□□□□ 0.29
NPIPB3Q92617 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NPIPB3Q92617 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.85■□□□□ 0.29
NPIPB3Q92617 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NPIPB3Q92617 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NPIPB3Q92617 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPB3Q92617 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPB3Q92617 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.85■□□□□ 0.29
NPIPB3Q92617 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.85■□□□□ 0.29
NPIPB3Q92617 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.85■□□□□ 0.29
NPIPB3Q92617 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms