Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.95■■□□□ 1.26
DDX1Q92499 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
DDX1Q92499 AL137784.2-201ENST00000607332 1000 ntBASIC22.95■■□□□ 1.26
DDX1Q92499 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
DDX1Q92499 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX1Q92499 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.94■■□□□ 1.26
DDX1Q92499 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.94■■□□□ 1.26
DDX1Q92499 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.94■■□□□ 1.26
DDX1Q92499 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX1Q92499 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX1Q92499 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX1Q92499 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.94■■□□□ 1.26
DDX1Q92499 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX1Q92499 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
DDX1Q92499 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.94■■□□□ 1.26
DDX1Q92499 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX1Q92499 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX1Q92499 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
DDX1Q92499 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.93■■□□□ 1.26
DDX1Q92499 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.93■■□□□ 1.26
DDX1Q92499 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX1Q92499 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.93■■□□□ 1.26
DDX1Q92499 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
DDX1Q92499 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX1Q92499 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
DDX1Q92499 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX1Q92499 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.92■■□□□ 1.26
DDX1Q92499 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX1Q92499 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX1Q92499 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.92■■□□□ 1.26
DDX1Q92499 AC007375.3-201ENST00000600936 2314 ntBASIC22.92■■□□□ 1.26
DDX1Q92499 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.92■■□□□ 1.26
DDX1Q92499 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX1Q92499 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.92■■□□□ 1.26
DDX1Q92499 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.92■■□□□ 1.26
DDX1Q92499 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
DDX1Q92499 IRS3P-201ENST00000223076 1006 ntBASIC22.92■■□□□ 1.26
DDX1Q92499 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX1Q92499 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX1Q92499 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX1Q92499 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
DDX1Q92499 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
DDX1Q92499 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
DDX1Q92499 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.91■■□□□ 1.26
DDX1Q92499 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX1Q92499 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX1Q92499 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX1Q92499 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX1Q92499 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
DDX1Q92499 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX1Q92499 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.91■■□□□ 1.26
DDX1Q92499 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
DDX1Q92499 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX1Q92499 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.9■■□□□ 1.26
DDX1Q92499 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX1Q92499 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
DDX1Q92499 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
DDX1Q92499 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX1Q92499 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.9■■□□□ 1.26
DDX1Q92499 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
DDX1Q92499 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.9■■□□□ 1.26
DDX1Q92499 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.9■■□□□ 1.26
DDX1Q92499 AC027682.1-201ENST00000562846 899 ntBASIC22.9■■□□□ 1.26
DDX1Q92499 AC008764.7-201ENST00000593779 1081 ntBASIC22.9■■□□□ 1.26
DDX1Q92499 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
DDX1Q92499 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.9■■□□□ 1.26
DDX1Q92499 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
DDX1Q92499 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX1Q92499 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
DDX1Q92499 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX1Q92499 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.9■■□□□ 1.26
DDX1Q92499 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.9■■□□□ 1.26
DDX1Q92499 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
DDX1Q92499 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
DDX1Q92499 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.89■■□□□ 1.26
DDX1Q92499 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
DDX1Q92499 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
DDX1Q92499 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX1Q92499 AC099791.1-201ENST00000416440 715 ntBASIC22.89■■□□□ 1.25
DDX1Q92499 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.89■■□□□ 1.25
DDX1Q92499 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.89■■□□□ 1.25
DDX1Q92499 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
DDX1Q92499 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
DDX1Q92499 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
DDX1Q92499 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX1Q92499 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
DDX1Q92499 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX1Q92499 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.88■■□□□ 1.25
DDX1Q92499 IGHV3-19-201ENST00000521488 291 ntBASIC22.88■■□□□ 1.25
DDX1Q92499 SMUG1P1-201ENST00000590640 811 ntBASIC22.88■■□□□ 1.25
DDX1Q92499 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.88■■□□□ 1.25
DDX1Q92499 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.88■■□□□ 1.25
DDX1Q92499 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX1Q92499 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DDX1Q92499 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.87■■□□□ 1.25
DDX1Q92499 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
DDX1Q92499 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.87■■□□□ 1.25
DDX1Q92499 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.87■■□□□ 1.25
DDX1Q92499 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX1Q92499 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms