Protein–RNA interactions for Protein: Q8WVK7

SKA2, Spindle and kinetochore-associated protein 2, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2Q8WVK7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SKA2Q8WVK7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SKA2Q8WVK7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.23■□□□□ 0.99
SKA2Q8WVK7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SKA2Q8WVK7 MIR638-201ENST00000385237 100 ntBASIC21.23■□□□□ 0.99
SKA2Q8WVK7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.23■□□□□ 0.99
SKA2Q8WVK7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SKA2Q8WVK7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SKA2Q8WVK7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SKA2Q8WVK7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SKA2Q8WVK7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.23■□□□□ 0.99
SKA2Q8WVK7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.23■□□□□ 0.99
SKA2Q8WVK7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SKA2Q8WVK7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.23■□□□□ 0.99
SKA2Q8WVK7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SKA2Q8WVK7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SKA2Q8WVK7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SKA2Q8WVK7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SKA2Q8WVK7 AC079834.2-201ENST00000609776 1949 ntBASIC21.22■□□□□ 0.99
SKA2Q8WVK7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SKA2Q8WVK7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.22■□□□□ 0.99
SKA2Q8WVK7 SUDS3P1-201ENST00000505831 966 ntBASIC21.22■□□□□ 0.99
SKA2Q8WVK7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.22■□□□□ 0.99
SKA2Q8WVK7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SKA2Q8WVK7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SKA2Q8WVK7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SKA2Q8WVK7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SKA2Q8WVK7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SKA2Q8WVK7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SKA2Q8WVK7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.21■□□□□ 0.99
SKA2Q8WVK7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SKA2Q8WVK7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SKA2Q8WVK7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SKA2Q8WVK7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SKA2Q8WVK7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SKA2Q8WVK7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SKA2Q8WVK7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
SKA2Q8WVK7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.2■□□□□ 0.98
SKA2Q8WVK7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SKA2Q8WVK7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.2■□□□□ 0.98
SKA2Q8WVK7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.2■□□□□ 0.98
SKA2Q8WVK7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SKA2Q8WVK7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.2■□□□□ 0.98
SKA2Q8WVK7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SKA2Q8WVK7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SKA2Q8WVK7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SKA2Q8WVK7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.17■□□□□ 0.98
SKA2Q8WVK7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.17■□□□□ 0.98
SKA2Q8WVK7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
SKA2Q8WVK7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.17■□□□□ 0.98
SKA2Q8WVK7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SKA2Q8WVK7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.17■□□□□ 0.98
SKA2Q8WVK7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SKA2Q8WVK7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SKA2Q8WVK7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
SKA2Q8WVK7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
SKA2Q8WVK7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SKA2Q8WVK7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SKA2Q8WVK7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms