Protein–RNA interactions for Protein: Q8WU76

SCFD2, Sec1 family domain-containing protein 2, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2Q8WU76 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCFD2Q8WU76 MFSD11-216ENST00000590393 1141 ntBASIC24.33■■□□□ 1.49
SCFD2Q8WU76 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SCFD2Q8WU76 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SCFD2Q8WU76 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SCFD2Q8WU76 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SCFD2Q8WU76 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.32■■□□□ 1.48
SCFD2Q8WU76 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCFD2Q8WU76 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SCFD2Q8WU76 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.32■■□□□ 1.48
SCFD2Q8WU76 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.32■■□□□ 1.48
SCFD2Q8WU76 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCFD2Q8WU76 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
SCFD2Q8WU76 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCFD2Q8WU76 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.32■■□□□ 1.48
SCFD2Q8WU76 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCFD2Q8WU76 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.32■■□□□ 1.48
SCFD2Q8WU76 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCFD2Q8WU76 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SCFD2Q8WU76 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCFD2Q8WU76 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.31■■□□□ 1.48
SCFD2Q8WU76 C9orf163-202ENST00000624034 2573 ntBASIC24.31■■□□□ 1.48
SCFD2Q8WU76 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCFD2Q8WU76 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCFD2Q8WU76 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SCFD2Q8WU76 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SCFD2Q8WU76 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SCFD2Q8WU76 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCFD2Q8WU76 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.31■■□□□ 1.48
SCFD2Q8WU76 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.31■■□□□ 1.48
SCFD2Q8WU76 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.31■■□□□ 1.48
SCFD2Q8WU76 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCFD2Q8WU76 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
SCFD2Q8WU76 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
SCFD2Q8WU76 AP004607.7-201ENST00000527152 1677 ntBASIC24.3■■□□□ 1.48
SCFD2Q8WU76 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SCFD2Q8WU76 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SCFD2Q8WU76 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
SCFD2Q8WU76 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.3■■□□□ 1.48
SCFD2Q8WU76 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.3■■□□□ 1.48
SCFD2Q8WU76 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.3■■□□□ 1.48
SCFD2Q8WU76 AC104771.1-201ENST00000603335 964 ntBASIC24.3■■□□□ 1.48
SCFD2Q8WU76 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SCFD2Q8WU76 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.3■■□□□ 1.48
SCFD2Q8WU76 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SCFD2Q8WU76 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SCFD2Q8WU76 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
SCFD2Q8WU76 OR7E47P-201ENST00000546390 1422 ntBASIC24.29■■□□□ 1.48
SCFD2Q8WU76 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCFD2Q8WU76 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCFD2Q8WU76 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.29■■□□□ 1.48
SCFD2Q8WU76 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.29■■□□□ 1.48
SCFD2Q8WU76 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.29■■□□□ 1.48
SCFD2Q8WU76 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SCFD2Q8WU76 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
SCFD2Q8WU76 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCFD2Q8WU76 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
SCFD2Q8WU76 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.28■■□□□ 1.48
SCFD2Q8WU76 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.28■■□□□ 1.48
SCFD2Q8WU76 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCFD2Q8WU76 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
SCFD2Q8WU76 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCFD2Q8WU76 MIR663A-201ENST00000385250 93 ntBASIC24.28■■□□□ 1.48
SCFD2Q8WU76 NCF1B-203ENST00000435988 1254 ntBASIC24.28■■□□□ 1.48
SCFD2Q8WU76 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.28■■□□□ 1.48
SCFD2Q8WU76 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.28■■□□□ 1.48
SCFD2Q8WU76 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.28■■□□□ 1.48
SCFD2Q8WU76 AP001160.3-201ENST00000601484 763 ntBASIC24.28■■□□□ 1.48
SCFD2Q8WU76 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCFD2Q8WU76 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCFD2Q8WU76 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SCFD2Q8WU76 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SCFD2Q8WU76 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.27■■□□□ 1.48
SCFD2Q8WU76 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SCFD2Q8WU76 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.27■■□□□ 1.48
SCFD2Q8WU76 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.27■■□□□ 1.48
SCFD2Q8WU76 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.27■■□□□ 1.48
SCFD2Q8WU76 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.27■■□□□ 1.48
SCFD2Q8WU76 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.27■■□□□ 1.48
SCFD2Q8WU76 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.27■■□□□ 1.48
SCFD2Q8WU76 UBE2DNL-204ENST00000602536 740 ntBASIC24.27■■□□□ 1.48
SCFD2Q8WU76 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC24.27■■□□□ 1.48
SCFD2Q8WU76 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SCFD2Q8WU76 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SCFD2Q8WU76 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.26■■□□□ 1.47
SCFD2Q8WU76 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SCFD2Q8WU76 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SCFD2Q8WU76 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SCFD2Q8WU76 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.26■■□□□ 1.47
SCFD2Q8WU76 AL034346.1-201ENST00000568244 1277 ntBASIC24.26■■□□□ 1.47
SCFD2Q8WU76 AL109923.1-201ENST00000618799 583 ntBASIC24.26■■□□□ 1.47
SCFD2Q8WU76 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.26■■□□□ 1.47
SCFD2Q8WU76 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.26■■□□□ 1.47
SCFD2Q8WU76 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
SCFD2Q8WU76 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
SCFD2Q8WU76 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.25■■□□□ 1.47
SCFD2Q8WU76 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
SCFD2Q8WU76 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SCFD2Q8WU76 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.25■■□□□ 1.47
SCFD2Q8WU76 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms