Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCER1Q8TC90 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.98■■■□□ 2.71
CCER1Q8TC90 MIR3621-201ENST00000580529 85 ntBASIC31.98■■■□□ 2.71
CCER1Q8TC90 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC31.98■■■□□ 2.71
CCER1Q8TC90 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCER1Q8TC90 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC31.98■■■□□ 2.71
CCER1Q8TC90 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCER1Q8TC90 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCER1Q8TC90 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
CCER1Q8TC90 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CCER1Q8TC90 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC31.97■■■□□ 2.71
CCER1Q8TC90 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC31.97■■■□□ 2.71
CCER1Q8TC90 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CCER1Q8TC90 GUSBP5-201ENST00000418136 578 ntBASIC31.97■■■□□ 2.71
CCER1Q8TC90 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC31.97■■■□□ 2.71
CCER1Q8TC90 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC31.97■■■□□ 2.71
CCER1Q8TC90 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC31.97■■■□□ 2.71
CCER1Q8TC90 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CCER1Q8TC90 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CCER1Q8TC90 FEM1AP4-201ENST00000443167 1987 ntBASIC31.96■■■□□ 2.71
CCER1Q8TC90 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
CCER1Q8TC90 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCER1Q8TC90 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC31.96■■■□□ 2.71
CCER1Q8TC90 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCER1Q8TC90 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC31.96■■■□□ 2.71
CCER1Q8TC90 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
CCER1Q8TC90 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC31.96■■■□□ 2.71
CCER1Q8TC90 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC31.96■■■□□ 2.71
CCER1Q8TC90 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC31.96■■■□□ 2.71
CCER1Q8TC90 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCER1Q8TC90 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCER1Q8TC90 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CCER1Q8TC90 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.95■■■□□ 2.71
CCER1Q8TC90 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
CCER1Q8TC90 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CCER1Q8TC90 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
CCER1Q8TC90 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC31.95■■■□□ 2.7
CCER1Q8TC90 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CCER1Q8TC90 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCER1Q8TC90 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCER1Q8TC90 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC31.94■■■□□ 2.7
CCER1Q8TC90 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
CCER1Q8TC90 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC31.94■■■□□ 2.7
CCER1Q8TC90 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCER1Q8TC90 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCER1Q8TC90 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCER1Q8TC90 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCER1Q8TC90 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCER1Q8TC90 RBM38-205ENST00000440234 686 ntTSL 2 BASIC31.93■■■□□ 2.7
CCER1Q8TC90 QDPR-206ENST00000508623 601 ntTSL 3 BASIC31.93■■■□□ 2.7
CCER1Q8TC90 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CCER1Q8TC90 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCER1Q8TC90 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCER1Q8TC90 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
CCER1Q8TC90 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC31.93■■■□□ 2.7
CCER1Q8TC90 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC31.93■■■□□ 2.7
CCER1Q8TC90 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC31.93■■■□□ 2.7
CCER1Q8TC90 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC31.92■■■□□ 2.7
CCER1Q8TC90 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCER1Q8TC90 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.92■■■□□ 2.7
CCER1Q8TC90 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC31.92■■■□□ 2.7
CCER1Q8TC90 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC31.92■■■□□ 2.7
CCER1Q8TC90 AC010525.1-201ENST00000585559 441 ntBASIC31.92■■■□□ 2.7
CCER1Q8TC90 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
CCER1Q8TC90 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCER1Q8TC90 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCER1Q8TC90 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC31.92■■■□□ 2.7
CCER1Q8TC90 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.91■■■□□ 2.7
CCER1Q8TC90 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CCER1Q8TC90 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCER1Q8TC90 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCER1Q8TC90 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCER1Q8TC90 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC31.91■■■□□ 2.7
CCER1Q8TC90 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CCER1Q8TC90 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CCER1Q8TC90 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCER1Q8TC90 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC31.9■■■□□ 2.7
CCER1Q8TC90 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCER1Q8TC90 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC31.9■■■□□ 2.7
CCER1Q8TC90 OR2I1P-207ENST00000453522 948 ntBASIC31.9■■■□□ 2.7
CCER1Q8TC90 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC31.9■■■□□ 2.7
CCER1Q8TC90 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
CCER1Q8TC90 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CCER1Q8TC90 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CCER1Q8TC90 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC31.9■■■□□ 2.7
CCER1Q8TC90 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CCER1Q8TC90 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC31.89■■■□□ 2.7
CCER1Q8TC90 SRD5A1P1-201ENST00000442297 786 ntBASIC31.89■■■□□ 2.7
CCER1Q8TC90 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.89■■■□□ 2.7
CCER1Q8TC90 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CCER1Q8TC90 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.89■■■□□ 2.7
CCER1Q8TC90 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC31.89■■■□□ 2.7
CCER1Q8TC90 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.69
CCER1Q8TC90 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCER1Q8TC90 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCER1Q8TC90 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCER1Q8TC90 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCER1Q8TC90 AL512631.2-201ENST00000604634 923 ntBASIC31.88■■■□□ 2.69
CCER1Q8TC90 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC31.88■■■□□ 2.69
CCER1Q8TC90 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC31.88■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms