Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGCLL1Q8TB92 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCLL1Q8TB92 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HMGCLL1Q8TB92 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCLL1Q8TB92 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCLL1Q8TB92 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.12■□□□□ 0.97
HMGCLL1Q8TB92 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HMGCLL1Q8TB92 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.11■□□□□ 0.97
HMGCLL1Q8TB92 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.11■□□□□ 0.97
HMGCLL1Q8TB92 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCLL1Q8TB92 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.11■□□□□ 0.97
HMGCLL1Q8TB92 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCLL1Q8TB92 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HMGCLL1Q8TB92 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCLL1Q8TB92 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCLL1Q8TB92 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCLL1Q8TB92 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCLL1Q8TB92 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCLL1Q8TB92 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
HMGCLL1Q8TB92 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.1■□□□□ 0.97
HMGCLL1Q8TB92 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCLL1Q8TB92 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HMGCLL1Q8TB92 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.1■□□□□ 0.97
HMGCLL1Q8TB92 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCLL1Q8TB92 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.1■□□□□ 0.97
HMGCLL1Q8TB92 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCLL1Q8TB92 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCLL1Q8TB92 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCLL1Q8TB92 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.1■□□□□ 0.97
HMGCLL1Q8TB92 OXCT2P1-201ENST00000447263 1535 ntBASIC21.09■□□□□ 0.97
HMGCLL1Q8TB92 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLL1Q8TB92 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.09■□□□□ 0.97
HMGCLL1Q8TB92 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.09■□□□□ 0.97
HMGCLL1Q8TB92 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLL1Q8TB92 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLL1Q8TB92 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLL1Q8TB92 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLL1Q8TB92 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLL1Q8TB92 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.09■□□□□ 0.97
HMGCLL1Q8TB92 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLL1Q8TB92 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
HMGCLL1Q8TB92 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.09■□□□□ 0.97
HMGCLL1Q8TB92 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLL1Q8TB92 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLL1Q8TB92 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.08■□□□□ 0.97
HMGCLL1Q8TB92 TSPY26P-201ENST00000476365 1326 ntBASIC21.08■□□□□ 0.97
HMGCLL1Q8TB92 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGCLL1Q8TB92 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HMGCLL1Q8TB92 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.08■□□□□ 0.97
HMGCLL1Q8TB92 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.08■□□□□ 0.97
HMGCLL1Q8TB92 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.08■□□□□ 0.97
HMGCLL1Q8TB92 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.08■□□□□ 0.97
HMGCLL1Q8TB92 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.08■□□□□ 0.97
HMGCLL1Q8TB92 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.08■□□□□ 0.96
HMGCLL1Q8TB92 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HMGCLL1Q8TB92 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
HMGCLL1Q8TB92 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCLL1Q8TB92 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.07■□□□□ 0.96
HMGCLL1Q8TB92 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCLL1Q8TB92 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
HMGCLL1Q8TB92 AC105265.2-201ENST00000467189 838 ntBASIC21.07■□□□□ 0.96
HMGCLL1Q8TB92 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCLL1Q8TB92 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCLL1Q8TB92 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
HMGCLL1Q8TB92 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCLL1Q8TB92 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCLL1Q8TB92 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCLL1Q8TB92 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.06■□□□□ 0.96
HMGCLL1Q8TB92 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
HMGCLL1Q8TB92 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.06■□□□□ 0.96
HMGCLL1Q8TB92 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCLL1Q8TB92 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCLL1Q8TB92 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.05■□□□□ 0.96
HMGCLL1Q8TB92 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCLL1Q8TB92 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCLL1Q8TB92 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCLL1Q8TB92 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCLL1Q8TB92 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
HMGCLL1Q8TB92 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.05■□□□□ 0.96
HMGCLL1Q8TB92 AC005229.4-201ENST00000610085 2198 ntBASIC21.05■□□□□ 0.96
HMGCLL1Q8TB92 MIR572-201ENST00000384983 95 ntBASIC21.05■□□□□ 0.96
HMGCLL1Q8TB92 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.05■□□□□ 0.96
HMGCLL1Q8TB92 AC079089.2-201ENST00000531211 1277 ntBASIC21.05■□□□□ 0.96
HMGCLL1Q8TB92 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.05■□□□□ 0.96
HMGCLL1Q8TB92 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HMGCLL1Q8TB92 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCLL1Q8TB92 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCLL1Q8TB92 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLL1Q8TB92 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLL1Q8TB92 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLL1Q8TB92 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLL1Q8TB92 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLL1Q8TB92 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLL1Q8TB92 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLL1Q8TB92 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HMGCLL1Q8TB92 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLL1Q8TB92 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HMGCLL1Q8TB92 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.04■□□□□ 0.96
HMGCLL1Q8TB92 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLL1Q8TB92 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms