Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HIPK4Q8NE63 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.74■□□□□ 0.91
HIPK4Q8NE63 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HIPK4Q8NE63 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.73■□□□□ 0.91
HIPK4Q8NE63 LINC01960-201ENST00000563759 1884 ntBASIC20.73■□□□□ 0.91
HIPK4Q8NE63 LINC01521-201ENST00000504184 1943 ntBASIC20.73■□□□□ 0.91
HIPK4Q8NE63 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.73■□□□□ 0.91
HIPK4Q8NE63 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.73■□□□□ 0.91
HIPK4Q8NE63 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HIPK4Q8NE63 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HIPK4Q8NE63 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HIPK4Q8NE63 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
HIPK4Q8NE63 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK4Q8NE63 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.72■□□□□ 0.91
HIPK4Q8NE63 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK4Q8NE63 FEM1AP4-201ENST00000443167 1987 ntBASIC20.72■□□□□ 0.91
HIPK4Q8NE63 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK4Q8NE63 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK4Q8NE63 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK4Q8NE63 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.72■□□□□ 0.91
HIPK4Q8NE63 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.72■□□□□ 0.91
HIPK4Q8NE63 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK4Q8NE63 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK4Q8NE63 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK4Q8NE63 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.72■□□□□ 0.91
HIPK4Q8NE63 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK4Q8NE63 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HIPK4Q8NE63 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK4Q8NE63 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
HIPK4Q8NE63 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.71■□□□□ 0.91
HIPK4Q8NE63 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HIPK4Q8NE63 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIPK4Q8NE63 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIPK4Q8NE63 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
HIPK4Q8NE63 AL031848.2-201ENST00000607670 837 ntBASIC20.71■□□□□ 0.91
HIPK4Q8NE63 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.71■□□□□ 0.91
HIPK4Q8NE63 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.71■□□□□ 0.91
HIPK4Q8NE63 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIPK4Q8NE63 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HIPK4Q8NE63 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.71■□□□□ 0.91
HIPK4Q8NE63 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.71■□□□□ 0.91
HIPK4Q8NE63 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.71■□□□□ 0.91
HIPK4Q8NE63 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
HIPK4Q8NE63 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 MIR6722-201ENST00000617286 78 ntBASIC20.7■□□□□ 0.9
HIPK4Q8NE63 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 AC005703.6-201ENST00000623265 1329 ntBASIC20.7■□□□□ 0.9
HIPK4Q8NE63 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.7■□□□□ 0.9
HIPK4Q8NE63 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.69■□□□□ 0.9
HIPK4Q8NE63 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HIPK4Q8NE63 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.69■□□□□ 0.9
HIPK4Q8NE63 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.69■□□□□ 0.9
HIPK4Q8NE63 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIPK4Q8NE63 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIPK4Q8NE63 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HIPK4Q8NE63 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIPK4Q8NE63 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK4Q8NE63 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK4Q8NE63 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HIPK4Q8NE63 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK4Q8NE63 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK4Q8NE63 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK4Q8NE63 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK4Q8NE63 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
HIPK4Q8NE63 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK4Q8NE63 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.68■□□□□ 0.9
HIPK4Q8NE63 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK4Q8NE63 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.68■□□□□ 0.9
HIPK4Q8NE63 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK4Q8NE63 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIPK4Q8NE63 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIPK4Q8NE63 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIPK4Q8NE63 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIPK4Q8NE63 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.67■□□□□ 0.9
HIPK4Q8NE63 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HIPK4Q8NE63 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIPK4Q8NE63 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.67■□□□□ 0.9
HIPK4Q8NE63 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIPK4Q8NE63 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.67■□□□□ 0.9
HIPK4Q8NE63 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIPK4Q8NE63 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIPK4Q8NE63 LINC01529-204ENST00000636474 1715 ntBASIC20.67■□□□□ 0.9
HIPK4Q8NE63 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms