Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC244015.2-201ENST00000616358 1861 ntBASIC19.65■□□□□ 0.74
LSMEM1Q8N8F7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
LSMEM1Q8N8F7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LSMEM1Q8N8F7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.74
LSMEM1Q8N8F7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSMEM1Q8N8F7 UNC93B3-201ENST00000308076 687 ntBASIC19.64■□□□□ 0.73
LSMEM1Q8N8F7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LSMEM1Q8N8F7 BX842568.3-201ENST00000418104 571 ntBASIC19.64■□□□□ 0.73
LSMEM1Q8N8F7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.64■□□□□ 0.73
LSMEM1Q8N8F7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LSMEM1Q8N8F7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.64■□□□□ 0.73
LSMEM1Q8N8F7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.64■□□□□ 0.73
LSMEM1Q8N8F7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LSMEM1Q8N8F7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
LSMEM1Q8N8F7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSMEM1Q8N8F7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSMEM1Q8N8F7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSMEM1Q8N8F7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSMEM1Q8N8F7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.63■□□□□ 0.73
LSMEM1Q8N8F7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSMEM1Q8N8F7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.63■□□□□ 0.73
LSMEM1Q8N8F7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSMEM1Q8N8F7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
LSMEM1Q8N8F7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.63■□□□□ 0.73
LSMEM1Q8N8F7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
LSMEM1Q8N8F7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSMEM1Q8N8F7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSMEM1Q8N8F7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.63■□□□□ 0.73
LSMEM1Q8N8F7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LSMEM1Q8N8F7 AC092667.1-201ENST00000434301 2586 ntBASIC19.63■□□□□ 0.73
LSMEM1Q8N8F7 AC007375.3-201ENST00000600936 2314 ntBASIC19.63■□□□□ 0.73
LSMEM1Q8N8F7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSMEM1Q8N8F7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSMEM1Q8N8F7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSMEM1Q8N8F7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.62■□□□□ 0.73
LSMEM1Q8N8F7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSMEM1Q8N8F7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSMEM1Q8N8F7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSMEM1Q8N8F7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSMEM1Q8N8F7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSMEM1Q8N8F7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LSMEM1Q8N8F7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LSMEM1Q8N8F7 MIR4767-201ENST00000582827 78 ntBASIC19.62■□□□□ 0.73
LSMEM1Q8N8F7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.62■□□□□ 0.73
LSMEM1Q8N8F7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.62■□□□□ 0.73
LSMEM1Q8N8F7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSMEM1Q8N8F7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
LSMEM1Q8N8F7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSMEM1Q8N8F7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LSMEM1Q8N8F7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 AL034346.1-201ENST00000568244 1277 ntBASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LSMEM1Q8N8F7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 AL136162.1-201ENST00000607711 1078 ntBASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.6■□□□□ 0.73
LSMEM1Q8N8F7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSMEM1Q8N8F7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.59■□□□□ 0.73
LSMEM1Q8N8F7 AC135279.3-201ENST00000610945 1311 ntBASIC19.59■□□□□ 0.73
LSMEM1Q8N8F7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
LSMEM1Q8N8F7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.59■□□□□ 0.73
LSMEM1Q8N8F7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LSMEM1Q8N8F7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.59■□□□□ 0.73
LSMEM1Q8N8F7 AC024257.2-201ENST00000549699 147 ntBASIC19.59■□□□□ 0.73
LSMEM1Q8N8F7 AC133561.4-201ENST00000566112 224 ntBASIC19.59■□□□□ 0.73
LSMEM1Q8N8F7 AC233992.3-201ENST00000607491 485 ntBASIC19.59■□□□□ 0.73
LSMEM1Q8N8F7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSMEM1Q8N8F7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms