Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PAF1Q8N7H5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PAF1Q8N7H5 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.96■■□□□ 1.11
PAF1Q8N7H5 MIR572-201ENST00000384983 95 ntBASIC21.96■■□□□ 1.11
PAF1Q8N7H5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.96■■□□□ 1.11
PAF1Q8N7H5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PAF1Q8N7H5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.96■■□□□ 1.11
PAF1Q8N7H5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PAF1Q8N7H5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.96■■□□□ 1.11
PAF1Q8N7H5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PAF1Q8N7H5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.96■■□□□ 1.11
PAF1Q8N7H5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PAF1Q8N7H5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PAF1Q8N7H5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PAF1Q8N7H5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.95■■□□□ 1.1
PAF1Q8N7H5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PAF1Q8N7H5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.95■■□□□ 1.1
PAF1Q8N7H5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PAF1Q8N7H5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
PAF1Q8N7H5 OXCT2P1-201ENST00000447263 1535 ntBASIC21.95■■□□□ 1.1
PAF1Q8N7H5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PAF1Q8N7H5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PAF1Q8N7H5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PAF1Q8N7H5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PAF1Q8N7H5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PAF1Q8N7H5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
PAF1Q8N7H5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.93■■□□□ 1.1
PAF1Q8N7H5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.93■■□□□ 1.1
PAF1Q8N7H5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.93■■□□□ 1.1
PAF1Q8N7H5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PAF1Q8N7H5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PAF1Q8N7H5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.92■■□□□ 1.1
PAF1Q8N7H5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.92■■□□□ 1.1
PAF1Q8N7H5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PAF1Q8N7H5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.92■■□□□ 1.1
PAF1Q8N7H5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PAF1Q8N7H5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.92■■□□□ 1.1
PAF1Q8N7H5 AC012414.1-201ENST00000556676 535 ntBASIC21.92■■□□□ 1.1
PAF1Q8N7H5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PAF1Q8N7H5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.92■■□□□ 1.1
PAF1Q8N7H5 MIR6084-201ENST00000622012 110 ntBASIC21.92■■□□□ 1.1
PAF1Q8N7H5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PAF1Q8N7H5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC21.92■■□□□ 1.1
PAF1Q8N7H5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.92■■□□□ 1.1
PAF1Q8N7H5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PAF1Q8N7H5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PAF1Q8N7H5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PAF1Q8N7H5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PAF1Q8N7H5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.91■■□□□ 1.1
PAF1Q8N7H5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PAF1Q8N7H5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PAF1Q8N7H5 AL354811.1-201ENST00000610286 706 ntBASIC21.91■■□□□ 1.1
PAF1Q8N7H5 AL358852.1-201ENST00000623174 1268 ntBASIC21.91■■□□□ 1.1
PAF1Q8N7H5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PAF1Q8N7H5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PAF1Q8N7H5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 AC012676.1-201ENST00000574705 1949 ntBASIC21.9■■□□□ 1.1
PAF1Q8N7H5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
PAF1Q8N7H5 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PAF1Q8N7H5 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PAF1Q8N7H5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PAF1Q8N7H5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms