Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 MIR572-201ENST00000384983 95 ntBASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 AC027612.3-201ENST00000413684 1047 ntBASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 AC123595.1-201ENST00000440769 1046 ntBASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 DUX4L2-201ENST00000561772 1275 ntBASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 DUX4L6-201ENST00000626483 1275 ntBASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 DUX4L1-201ENST00000627662 1275 ntBASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 DUX4L8-201ENST00000629013 1275 ntBASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 DUX4L3-201ENST00000630187 1275 ntBASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 DUX4L7-201ENST00000630678 1275 ntBASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 DUX4L5-201ENST00000630834 1275 ntBASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FBXO39Q8N4B4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
FBXO39Q8N4B4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
FBXO39Q8N4B4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.41■■□□□ 1.02
FBXO39Q8N4B4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.41■■□□□ 1.02
FBXO39Q8N4B4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
FBXO39Q8N4B4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
FBXO39Q8N4B4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
FBXO39Q8N4B4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
FBXO39Q8N4B4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.41■■□□□ 1.02
FBXO39Q8N4B4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
FBXO39Q8N4B4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.41■■□□□ 1.02
FBXO39Q8N4B4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FBXO39Q8N4B4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FBXO39Q8N4B4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FBXO39Q8N4B4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
FBXO39Q8N4B4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
FBXO39Q8N4B4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FBXO39Q8N4B4 AC133637.1-201ENST00000624115 1537 ntBASIC21.4■■□□□ 1.02
FBXO39Q8N4B4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.4■■□□□ 1.02
FBXO39Q8N4B4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.4■■□□□ 1.02
FBXO39Q8N4B4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
FBXO39Q8N4B4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FBXO39Q8N4B4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FBXO39Q8N4B4 MIR6084-201ENST00000622012 110 ntBASIC21.4■■□□□ 1.02
FBXO39Q8N4B4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.4■■□□□ 1.02
FBXO39Q8N4B4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FBXO39Q8N4B4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.4■■□□□ 1.02
FBXO39Q8N4B4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
FBXO39Q8N4B4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
FBXO39Q8N4B4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
FBXO39Q8N4B4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 AC012414.1-201ENST00000556676 535 ntBASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 AL354811.1-201ENST00000610286 706 ntBASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FBXO39Q8N4B4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.38■■□□□ 1.01
FBXO39Q8N4B4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
FBXO39Q8N4B4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
FBXO39Q8N4B4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.37■■□□□ 1.01
FBXO39Q8N4B4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.37■■□□□ 1.01
FBXO39Q8N4B4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
FBXO39Q8N4B4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
FBXO39Q8N4B4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms