Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF440Q8IYI8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF440Q8IYI8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF440Q8IYI8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF440Q8IYI8 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.64■□□□□ 0.74
ZNF440Q8IYI8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF440Q8IYI8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF440Q8IYI8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ZNF440Q8IYI8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
ZNF440Q8IYI8 AC104564.3-201ENST00000582367 638 ntBASIC19.64■□□□□ 0.73
ZNF440Q8IYI8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF440Q8IYI8 AC008764.7-201ENST00000593779 1081 ntBASIC19.64■□□□□ 0.73
ZNF440Q8IYI8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ZNF440Q8IYI8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF440Q8IYI8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF440Q8IYI8 AP004607.7-201ENST00000527152 1677 ntBASIC19.64■□□□□ 0.73
ZNF440Q8IYI8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF440Q8IYI8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF440Q8IYI8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF440Q8IYI8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF440Q8IYI8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.64■□□□□ 0.73
ZNF440Q8IYI8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 AL355001.2-201ENST00000620617 1191 ntBASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF440Q8IYI8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF440Q8IYI8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF440Q8IYI8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF440Q8IYI8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF440Q8IYI8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF440Q8IYI8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF440Q8IYI8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF440Q8IYI8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.62■□□□□ 0.73
ZNF440Q8IYI8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF440Q8IYI8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ZNF440Q8IYI8 AC099791.1-201ENST00000416440 715 ntBASIC19.62■□□□□ 0.73
ZNF440Q8IYI8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF440Q8IYI8 AC244015.2-201ENST00000616358 1861 ntBASIC19.62■□□□□ 0.73
ZNF440Q8IYI8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF440Q8IYI8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF440Q8IYI8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF440Q8IYI8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 AC110285.6-201ENST00000617652 491 ntBASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF440Q8IYI8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 SMUG1P1-201ENST00000590640 811 ntBASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF440Q8IYI8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF440Q8IYI8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF440Q8IYI8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms