Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 PCDHAC2-203ENST00000615316 3011 ntBASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 GABARAPL3-202ENST00000624044 1851 ntBASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LYSMD2Q8IV50 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LYSMD2Q8IV50 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
LYSMD2Q8IV50 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
LYSMD2Q8IV50 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
LYSMD2Q8IV50 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.83■□□□□ 0.61
LYSMD2Q8IV50 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LYSMD2Q8IV50 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
LYSMD2Q8IV50 GPX1-201ENST00000419349 1106 ntBASIC18.83■□□□□ 0.6
LYSMD2Q8IV50 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LYSMD2Q8IV50 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LYSMD2Q8IV50 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LYSMD2Q8IV50 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LYSMD2Q8IV50 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
LYSMD2Q8IV50 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LYSMD2Q8IV50 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.83■□□□□ 0.6
LYSMD2Q8IV50 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LYSMD2Q8IV50 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.83■□□□□ 0.6
LYSMD2Q8IV50 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYSMD2Q8IV50 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.81■□□□□ 0.6
LYSMD2Q8IV50 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD2Q8IV50 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD2Q8IV50 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LYSMD2Q8IV50 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD2Q8IV50 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LYSMD2Q8IV50 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD2Q8IV50 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD2Q8IV50 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD2Q8IV50 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.79■□□□□ 0.6
LYSMD2Q8IV50 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD2Q8IV50 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LYSMD2Q8IV50 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LYSMD2Q8IV50 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
LYSMD2Q8IV50 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD2Q8IV50 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD2Q8IV50 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD2Q8IV50 LONRF2P2-201ENST00000439212 571 ntBASIC18.79■□□□□ 0.6
LYSMD2Q8IV50 MIR7108-201ENST00000614319 87 ntBASIC18.79■□□□□ 0.6
LYSMD2Q8IV50 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD2Q8IV50 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD2Q8IV50 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD2Q8IV50 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms