Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC190Q86UF4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC190Q86UF4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC190Q86UF4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC190Q86UF4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC190Q86UF4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC190Q86UF4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC190Q86UF4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC190Q86UF4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC190Q86UF4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CCDC190Q86UF4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC190Q86UF4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC190Q86UF4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC190Q86UF4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC190Q86UF4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC190Q86UF4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC190Q86UF4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC190Q86UF4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC190Q86UF4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC190Q86UF4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC190Q86UF4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC190Q86UF4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC190Q86UF4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC190Q86UF4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CCDC190Q86UF4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC190Q86UF4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCDC190Q86UF4 AL049796.1-201ENST00000565336 1766 ntBASIC18.7■□□□□ 0.58
CCDC190Q86UF4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC190Q86UF4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC190Q86UF4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC190Q86UF4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC190Q86UF4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CCDC190Q86UF4 PCDHAC2-203ENST00000615316 3011 ntBASIC18.7■□□□□ 0.58
CCDC190Q86UF4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC190Q86UF4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC190Q86UF4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC190Q86UF4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC190Q86UF4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC190Q86UF4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC190Q86UF4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC190Q86UF4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC190Q86UF4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC190Q86UF4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC190Q86UF4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 LINC01529-204ENST00000636474 1715 ntBASIC18.69■□□□□ 0.58
CCDC190Q86UF4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 AC087393.1-201ENST00000582896 145 ntBASIC18.69■□□□□ 0.58
CCDC190Q86UF4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC190Q86UF4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC190Q86UF4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC190Q86UF4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC190Q86UF4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC190Q86UF4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC190Q86UF4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC190Q86UF4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC190Q86UF4 AC026471.6-201ENST00000622954 1905 ntBASIC18.67■□□□□ 0.58
CCDC190Q86UF4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC190Q86UF4 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC190Q86UF4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC190Q86UF4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC190Q86UF4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC190Q86UF4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC190Q86UF4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC190Q86UF4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC190Q86UF4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms