Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS13CQ709C8 MYCNOS-205ENST00000641950 531 ntBASIC18.08■□□□□ 0.48
VPS13CQ709C8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS13CQ709C8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
VPS13CQ709C8 UNC93B4-201ENST00000505679 747 ntBASIC18.07■□□□□ 0.48
VPS13CQ709C8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS13CQ709C8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.07■□□□□ 0.48
VPS13CQ709C8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
VPS13CQ709C8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS13CQ709C8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS13CQ709C8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.07■□□□□ 0.48
VPS13CQ709C8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS13CQ709C8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VPS13CQ709C8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
VPS13CQ709C8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS13CQ709C8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS13CQ709C8 AC008550.1-201ENST00000511500 884 ntBASIC18.06■□□□□ 0.48
VPS13CQ709C8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS13CQ709C8 AP006294.2-201ENST00000641667 209 ntBASIC18.06■□□□□ 0.48
VPS13CQ709C8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS13CQ709C8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS13CQ709C8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.06■□□□□ 0.48
VPS13CQ709C8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.06■□□□□ 0.48
VPS13CQ709C8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS13CQ709C8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.06■□□□□ 0.48
VPS13CQ709C8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.06■□□□□ 0.48
VPS13CQ709C8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.06■□□□□ 0.48
VPS13CQ709C8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.06■□□□□ 0.48
VPS13CQ709C8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS13CQ709C8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS13CQ709C8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS13CQ709C8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.05■□□□□ 0.48
VPS13CQ709C8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS13CQ709C8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS13CQ709C8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.05■□□□□ 0.48
VPS13CQ709C8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS13CQ709C8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS13CQ709C8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS13CQ709C8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS13CQ709C8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
VPS13CQ709C8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS13CQ709C8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS13CQ709C8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
VPS13CQ709C8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS13CQ709C8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
VPS13CQ709C8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
VPS13CQ709C8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS13CQ709C8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS13CQ709C8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS13CQ709C8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS13CQ709C8 OXCT2P1-201ENST00000447263 1535 ntBASIC18.04■□□□□ 0.48
VPS13CQ709C8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS13CQ709C8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VPS13CQ709C8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
VPS13CQ709C8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.04■□□□□ 0.48
VPS13CQ709C8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.04■□□□□ 0.48
VPS13CQ709C8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS13CQ709C8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VPS13CQ709C8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
VPS13CQ709C8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.04■□□□□ 0.48
VPS13CQ709C8 AC073648.6-201ENST00000641589 218 ntBASIC18.04■□□□□ 0.48
VPS13CQ709C8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
VPS13CQ709C8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VPS13CQ709C8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.04■□□□□ 0.48
VPS13CQ709C8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.04■□□□□ 0.48
VPS13CQ709C8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
VPS13CQ709C8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
VPS13CQ709C8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
VPS13CQ709C8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.03■□□□□ 0.48
VPS13CQ709C8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.03■□□□□ 0.48
VPS13CQ709C8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.03■□□□□ 0.48
VPS13CQ709C8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS13CQ709C8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS13CQ709C8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.03■□□□□ 0.48
VPS13CQ709C8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
VPS13CQ709C8 AC010141.3-201ENST00000456659 717 ntBASIC18.03■□□□□ 0.48
VPS13CQ709C8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.03■□□□□ 0.48
VPS13CQ709C8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS13CQ709C8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
VPS13CQ709C8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.03■□□□□ 0.48
VPS13CQ709C8 AC093787.1-201ENST00000450396 207 ntBASIC18.03■□□□□ 0.48
VPS13CQ709C8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.03■□□□□ 0.48
VPS13CQ709C8 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.03■□□□□ 0.48
VPS13CQ709C8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.03■□□□□ 0.48
VPS13CQ709C8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.02■□□□□ 0.48
VPS13CQ709C8 AC055733.4-201ENST00000638462 1354 ntBASIC18.02■□□□□ 0.48
VPS13CQ709C8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS13CQ709C8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS13CQ709C8 MIPEPP3-201ENST00000412105 444 ntBASIC18.02■□□□□ 0.48
VPS13CQ709C8 AP001160.3-201ENST00000601484 763 ntBASIC18.02■□□□□ 0.48
VPS13CQ709C8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.02■□□□□ 0.48
VPS13CQ709C8 AC010536.3-201ENST00000620306 533 ntBASIC18.02■□□□□ 0.48
VPS13CQ709C8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS13CQ709C8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
VPS13CQ709C8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS13CQ709C8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.02■□□□□ 0.48
VPS13CQ709C8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS13CQ709C8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.02■□□□□ 0.48
VPS13CQ709C8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.02■□□□□ 0.48
VPS13CQ709C8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms