Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB11FIP1Q6WKZ4 KRT87P-202ENST00000534226 1464 ntBASIC21.59■■□□□ 1.05
RAB11FIP1Q6WKZ4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.59■■□□□ 1.05
RAB11FIP1Q6WKZ4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB11FIP1Q6WKZ4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB11FIP1Q6WKZ4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.59■■□□□ 1.05
RAB11FIP1Q6WKZ4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB11FIP1Q6WKZ4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.59■■□□□ 1.05
RAB11FIP1Q6WKZ4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.59■■□□□ 1.05
RAB11FIP1Q6WKZ4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.59■■□□□ 1.05
RAB11FIP1Q6WKZ4 AC104187.1-201ENST00000607510 612 ntBASIC21.59■■□□□ 1.05
RAB11FIP1Q6WKZ4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAB11FIP1Q6WKZ4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAB11FIP1Q6WKZ4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAB11FIP1Q6WKZ4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.58■■□□□ 1.05
RAB11FIP1Q6WKZ4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.58■■□□□ 1.05
RAB11FIP1Q6WKZ4 BID-214ENST00000617586 542 ntTSL 5 BASIC21.58■■□□□ 1.05
RAB11FIP1Q6WKZ4 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.58■■□□□ 1.04
RAB11FIP1Q6WKZ4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.58■■□□□ 1.04
RAB11FIP1Q6WKZ4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.04
RAB11FIP1Q6WKZ4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
RAB11FIP1Q6WKZ4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.57■■□□□ 1.04
RAB11FIP1Q6WKZ4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAB11FIP1Q6WKZ4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RAB11FIP1Q6WKZ4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB11FIP1Q6WKZ4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RAB11FIP1Q6WKZ4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB11FIP1Q6WKZ4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RAB11FIP1Q6WKZ4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.57■■□□□ 1.04
RAB11FIP1Q6WKZ4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.57■■□□□ 1.04
RAB11FIP1Q6WKZ4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RAB11FIP1Q6WKZ4 AC055733.4-201ENST00000638462 1354 ntBASIC21.57■■□□□ 1.04
RAB11FIP1Q6WKZ4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RAB11FIP1Q6WKZ4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAB11FIP1Q6WKZ4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB11FIP1Q6WKZ4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.56■■□□□ 1.04
RAB11FIP1Q6WKZ4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.56■■□□□ 1.04
RAB11FIP1Q6WKZ4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB11FIP1Q6WKZ4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.56■■□□□ 1.04
RAB11FIP1Q6WKZ4 AC073111.5-205ENST00000641717 521 ntBASIC21.56■■□□□ 1.04
RAB11FIP1Q6WKZ4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB11FIP1Q6WKZ4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB11FIP1Q6WKZ4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
RAB11FIP1Q6WKZ4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 AC087742.1-201ENST00000575880 1738 ntBASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 CDCA4P2-201ENST00000441182 718 ntBASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.55■■□□□ 1.04
RAB11FIP1Q6WKZ4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB11FIP1Q6WKZ4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAB11FIP1Q6WKZ4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB11FIP1Q6WKZ4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAB11FIP1Q6WKZ4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB11FIP1Q6WKZ4 ID1-201ENST00000376105 1233 ntBASIC21.54■■□□□ 1.04
RAB11FIP1Q6WKZ4 KRT18P11-201ENST00000435214 1283 ntBASIC21.54■■□□□ 1.04
RAB11FIP1Q6WKZ4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAB11FIP1Q6WKZ4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.54■■□□□ 1.04
RAB11FIP1Q6WKZ4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.54■■□□□ 1.04
RAB11FIP1Q6WKZ4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.54■■□□□ 1.04
RAB11FIP1Q6WKZ4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB11FIP1Q6WKZ4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB11FIP1Q6WKZ4 AC068473.5-201ENST00000616428 2072 ntBASIC21.54■■□□□ 1.04
RAB11FIP1Q6WKZ4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB11FIP1Q6WKZ4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB11FIP1Q6WKZ4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAB11FIP1Q6WKZ4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB11FIP1Q6WKZ4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB11FIP1Q6WKZ4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB11FIP1Q6WKZ4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.53■■□□□ 1.04
RAB11FIP1Q6WKZ4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.53■■□□□ 1.04
RAB11FIP1Q6WKZ4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RAB11FIP1Q6WKZ4 AC011767.1-201ENST00000617410 1153 ntBASIC21.53■■□□□ 1.04
RAB11FIP1Q6WKZ4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB11FIP1Q6WKZ4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.53■■□□□ 1.04
RAB11FIP1Q6WKZ4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
RAB11FIP1Q6WKZ4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms