Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CASC1Q6TDU7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CASC1Q6TDU7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.21■■□□□ 1.79
CASC1Q6TDU7 AC008406.3-201ENST00000620001 1374 ntBASIC26.2■■□□□ 1.79
CASC1Q6TDU7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
CASC1Q6TDU7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.2■■□□□ 1.78
CASC1Q6TDU7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CASC1Q6TDU7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC26.2■■□□□ 1.78
CASC1Q6TDU7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CASC1Q6TDU7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC26.19■■□□□ 1.78
CASC1Q6TDU7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CASC1Q6TDU7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CASC1Q6TDU7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
CASC1Q6TDU7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CASC1Q6TDU7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CASC1Q6TDU7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
CASC1Q6TDU7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CASC1Q6TDU7 SERBP1P1-201ENST00000396021 1160 ntBASIC26.19■■□□□ 1.78
CASC1Q6TDU7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
CASC1Q6TDU7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
CASC1Q6TDU7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
CASC1Q6TDU7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
CASC1Q6TDU7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CASC1Q6TDU7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CASC1Q6TDU7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CASC1Q6TDU7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
CASC1Q6TDU7 AC010525.1-201ENST00000585559 441 ntBASIC26.18■■□□□ 1.78
CASC1Q6TDU7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CASC1Q6TDU7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CASC1Q6TDU7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CASC1Q6TDU7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.17■■□□□ 1.78
CASC1Q6TDU7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CASC1Q6TDU7 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.17■■□□□ 1.78
CASC1Q6TDU7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.17■■□□□ 1.78
CASC1Q6TDU7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CASC1Q6TDU7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CASC1Q6TDU7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CASC1Q6TDU7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
CASC1Q6TDU7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CASC1Q6TDU7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.16■■□□□ 1.78
CASC1Q6TDU7 OXCT2P1-201ENST00000447263 1535 ntBASIC26.16■■□□□ 1.78
CASC1Q6TDU7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.16■■□□□ 1.78
CASC1Q6TDU7 AC011298.3-201ENST00000615796 283 ntBASIC26.16■■□□□ 1.78
CASC1Q6TDU7 AC136469.2-201ENST00000623944 1028 ntBASIC26.16■■□□□ 1.78
CASC1Q6TDU7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC26.16■■□□□ 1.78
CASC1Q6TDU7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CASC1Q6TDU7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.16■■□□□ 1.78
CASC1Q6TDU7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CASC1Q6TDU7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC26.15■■□□□ 1.78
CASC1Q6TDU7 AC026310.3-201ENST00000625186 2373 ntBASIC26.15■■□□□ 1.78
CASC1Q6TDU7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.15■■□□□ 1.78
CASC1Q6TDU7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CASC1Q6TDU7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.15■■□□□ 1.78
CASC1Q6TDU7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CASC1Q6TDU7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.15■■□□□ 1.78
CASC1Q6TDU7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
CASC1Q6TDU7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CASC1Q6TDU7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
CASC1Q6TDU7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
CASC1Q6TDU7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
CASC1Q6TDU7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CASC1Q6TDU7 AL137060.1-201ENST00000618151 2648 ntBASIC26.15■■□□□ 1.78
CASC1Q6TDU7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CASC1Q6TDU7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC26.14■■□□□ 1.78
CASC1Q6TDU7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC26.14■■□□□ 1.78
CASC1Q6TDU7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CASC1Q6TDU7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC26.14■■□□□ 1.78
CASC1Q6TDU7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC26.14■■□□□ 1.78
CASC1Q6TDU7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
CASC1Q6TDU7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CASC1Q6TDU7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.14■■□□□ 1.78
CASC1Q6TDU7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC26.14■■□□□ 1.77
CASC1Q6TDU7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
CASC1Q6TDU7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC26.14■■□□□ 1.77
CASC1Q6TDU7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CASC1Q6TDU7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CASC1Q6TDU7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.13■■□□□ 1.77
CASC1Q6TDU7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CASC1Q6TDU7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CASC1Q6TDU7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CASC1Q6TDU7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC26.13■■□□□ 1.77
CASC1Q6TDU7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
CASC1Q6TDU7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
CASC1Q6TDU7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CASC1Q6TDU7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CASC1Q6TDU7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CASC1Q6TDU7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CASC1Q6TDU7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.12■■□□□ 1.77
CASC1Q6TDU7 AC104564.3-201ENST00000582367 638 ntBASIC26.12■■□□□ 1.77
CASC1Q6TDU7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.12■■□□□ 1.77
CASC1Q6TDU7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.12■■□□□ 1.77
CASC1Q6TDU7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
CASC1Q6TDU7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
CASC1Q6TDU7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.12■■□□□ 1.77
CASC1Q6TDU7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CASC1Q6TDU7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CASC1Q6TDU7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CASC1Q6TDU7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.11■■□□□ 1.77
CASC1Q6TDU7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CASC1Q6TDU7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms