Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR1Q6PIV2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR1Q6PIV2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR1Q6PIV2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR1Q6PIV2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR1Q6PIV2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
FOXR1Q6PIV2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR1Q6PIV2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.23■■□□□ 1.15
FOXR1Q6PIV2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.23■■□□□ 1.15
FOXR1Q6PIV2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR1Q6PIV2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.22■■□□□ 1.15
FOXR1Q6PIV2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
FOXR1Q6PIV2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
FOXR1Q6PIV2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FOXR1Q6PIV2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
FOXR1Q6PIV2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FOXR1Q6PIV2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FOXR1Q6PIV2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
FOXR1Q6PIV2 AC024257.2-201ENST00000549699 147 ntBASIC22.22■■□□□ 1.15
FOXR1Q6PIV2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.22■■□□□ 1.15
FOXR1Q6PIV2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
FOXR1Q6PIV2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
FOXR1Q6PIV2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FOXR1Q6PIV2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.22■■□□□ 1.15
FOXR1Q6PIV2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FOXR1Q6PIV2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
FOXR1Q6PIV2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
FOXR1Q6PIV2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.21■■□□□ 1.15
FOXR1Q6PIV2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
FOXR1Q6PIV2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
FOXR1Q6PIV2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
FOXR1Q6PIV2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.21■■□□□ 1.15
FOXR1Q6PIV2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
FOXR1Q6PIV2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.21■■□□□ 1.15
FOXR1Q6PIV2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
FOXR1Q6PIV2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
FOXR1Q6PIV2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
FOXR1Q6PIV2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
FOXR1Q6PIV2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.2■■□□□ 1.14
FOXR1Q6PIV2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.2■■□□□ 1.14
FOXR1Q6PIV2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR1Q6PIV2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR1Q6PIV2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.2■■□□□ 1.14
FOXR1Q6PIV2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR1Q6PIV2 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.2■■□□□ 1.14
FOXR1Q6PIV2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.2■■□□□ 1.14
FOXR1Q6PIV2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR1Q6PIV2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR1Q6PIV2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.2■■□□□ 1.14
FOXR1Q6PIV2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR1Q6PIV2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR1Q6PIV2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR1Q6PIV2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 LINC01006-201ENST00000333319 2292 ntBASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR1Q6PIV2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FOXR1Q6PIV2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms