Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
C11orf88Q6PI97 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
C11orf88Q6PI97 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.58■□□□□ 0.56
C11orf88Q6PI97 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
C11orf88Q6PI97 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
C11orf88Q6PI97 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
C11orf88Q6PI97 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 TSPY9P-201ENST00000440215 945 ntBASIC18.57■□□□□ 0.56
C11orf88Q6PI97 TSPY11P-201ENST00000442607 1045 ntBASIC18.57■□□□□ 0.56
C11orf88Q6PI97 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C11orf88Q6PI97 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.56■□□□□ 0.56
C11orf88Q6PI97 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
C11orf88Q6PI97 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.56■□□□□ 0.56
C11orf88Q6PI97 AC079630.1-202ENST00000618127 1840 ntBASIC18.56■□□□□ 0.56
C11orf88Q6PI97 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
C11orf88Q6PI97 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
C11orf88Q6PI97 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
C11orf88Q6PI97 FAM99A-202ENST00000538190 1989 ntBASIC18.56■□□□□ 0.56
C11orf88Q6PI97 AC080038.3-201ENST00000623346 1952 ntBASIC18.56■□□□□ 0.56
C11orf88Q6PI97 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.56■□□□□ 0.56
C11orf88Q6PI97 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.56■□□□□ 0.56
C11orf88Q6PI97 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
C11orf88Q6PI97 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
C11orf88Q6PI97 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.56■□□□□ 0.56
C11orf88Q6PI97 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
C11orf88Q6PI97 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.56■□□□□ 0.56
C11orf88Q6PI97 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
C11orf88Q6PI97 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
C11orf88Q6PI97 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C11orf88Q6PI97 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C11orf88Q6PI97 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
C11orf88Q6PI97 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C11orf88Q6PI97 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.55■□□□□ 0.56
C11orf88Q6PI97 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C11orf88Q6PI97 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
C11orf88Q6PI97 AC005229.4-201ENST00000610085 2198 ntBASIC18.55■□□□□ 0.56
C11orf88Q6PI97 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C11orf88Q6PI97 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C11orf88Q6PI97 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C11orf88Q6PI97 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C11orf88Q6PI97 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
C11orf88Q6PI97 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
C11orf88Q6PI97 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
C11orf88Q6PI97 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
C11orf88Q6PI97 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C11orf88Q6PI97 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
C11orf88Q6PI97 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.54■□□□□ 0.56
C11orf88Q6PI97 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.54■□□□□ 0.56
C11orf88Q6PI97 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.54■□□□□ 0.56
C11orf88Q6PI97 MTDHP2-201ENST00000601468 714 ntBASIC18.54■□□□□ 0.56
C11orf88Q6PI97 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.54■□□□□ 0.56
C11orf88Q6PI97 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C11orf88Q6PI97 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C11orf88Q6PI97 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
C11orf88Q6PI97 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
C11orf88Q6PI97 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
C11orf88Q6PI97 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
C11orf88Q6PI97 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
C11orf88Q6PI97 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
C11orf88Q6PI97 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
C11orf88Q6PI97 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
C11orf88Q6PI97 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
C11orf88Q6PI97 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
C11orf88Q6PI97 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
C11orf88Q6PI97 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.53■□□□□ 0.56
C11orf88Q6PI97 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.53■□□□□ 0.56
C11orf88Q6PI97 AC010997.5-201ENST00000609182 354 ntBASIC18.53■□□□□ 0.56
C11orf88Q6PI97 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C11orf88Q6PI97 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C11orf88Q6PI97 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
C11orf88Q6PI97 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C11orf88Q6PI97 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
C11orf88Q6PI97 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
C11orf88Q6PI97 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C11orf88Q6PI97 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C11orf88Q6PI97 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
C11orf88Q6PI97 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.52■□□□□ 0.56
C11orf88Q6PI97 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
C11orf88Q6PI97 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.52■□□□□ 0.56
C11orf88Q6PI97 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.52■□□□□ 0.56
C11orf88Q6PI97 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms