Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM53Q6P2H8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM53Q6P2H8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TMEM53Q6P2H8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 AC008406.3-201ENST00000620001 1374 ntBASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 DUX4L4-201ENST00000566884 1269 ntBASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TMEM53Q6P2H8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 AC009086.3-201ENST00000623486 1008 ntBASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 AL353803.4-201ENST00000565882 1934 ntBASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM53Q6P2H8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 AL136116.3-201ENST00000402907 1138 ntBASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 MIR4466-201ENST00000606121 54 ntBASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 AL158211.5-201ENST00000623583 2518 ntBASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM53Q6P2H8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEM53Q6P2H8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEM53Q6P2H8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM53Q6P2H8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEM53Q6P2H8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM53Q6P2H8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TMEM53Q6P2H8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEM53Q6P2H8 AC099791.2-201ENST00000605725 427 ntBASIC19.46■□□□□ 0.71
TMEM53Q6P2H8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TMEM53Q6P2H8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TMEM53Q6P2H8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM53Q6P2H8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM53Q6P2H8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM53Q6P2H8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM53Q6P2H8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TMEM53Q6P2H8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.46■□□□□ 0.71
TMEM53Q6P2H8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM53Q6P2H8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM53Q6P2H8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms