Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
RNF43Q68DV7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RNF43Q68DV7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.49■■□□□ 1.19
RNF43Q68DV7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF43Q68DV7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF43Q68DV7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.49■■□□□ 1.19
RNF43Q68DV7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.49■■□□□ 1.19
RNF43Q68DV7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.49■■□□□ 1.19
RNF43Q68DV7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF43Q68DV7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF43Q68DV7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
RNF43Q68DV7 AC242852.2-201ENST00000615738 1807 ntBASIC22.48■■□□□ 1.19
RNF43Q68DV7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF43Q68DV7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF43Q68DV7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF43Q68DV7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RNF43Q68DV7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RNF43Q68DV7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.48■■□□□ 1.19
RNF43Q68DV7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF43Q68DV7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.48■■□□□ 1.19
RNF43Q68DV7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF43Q68DV7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF43Q68DV7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF43Q68DV7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF43Q68DV7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF43Q68DV7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF43Q68DV7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF43Q68DV7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF43Q68DV7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF43Q68DV7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF43Q68DV7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF43Q68DV7 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.47■■□□□ 1.19
RNF43Q68DV7 AC010141.3-201ENST00000456659 717 ntBASIC22.47■■□□□ 1.19
RNF43Q68DV7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
RNF43Q68DV7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.47■■□□□ 1.19
RNF43Q68DV7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
RNF43Q68DV7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.47■■□□□ 1.19
RNF43Q68DV7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF43Q68DV7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
RNF43Q68DV7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
RNF43Q68DV7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF43Q68DV7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.46■■□□□ 1.19
RNF43Q68DV7 MIR6084-201ENST00000622012 110 ntBASIC22.46■■□□□ 1.19
RNF43Q68DV7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
RNF43Q68DV7 AL137060.1-201ENST00000618151 2648 ntBASIC22.46■■□□□ 1.19
RNF43Q68DV7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.46■■□□□ 1.19
RNF43Q68DV7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF43Q68DV7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF43Q68DV7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.46■■□□□ 1.19
RNF43Q68DV7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF43Q68DV7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RNF43Q68DV7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.45■■□□□ 1.19
RNF43Q68DV7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.45■■□□□ 1.19
RNF43Q68DV7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF43Q68DV7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF43Q68DV7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF43Q68DV7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.45■■□□□ 1.18
RNF43Q68DV7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.45■■□□□ 1.18
RNF43Q68DV7 AC105233.4-201ENST00000642045 216 ntBASIC22.45■■□□□ 1.18
RNF43Q68DV7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF43Q68DV7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
RNF43Q68DV7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
RNF43Q68DV7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF43Q68DV7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.44■■□□□ 1.18
RNF43Q68DV7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF43Q68DV7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF43Q68DV7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RNF43Q68DV7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF43Q68DV7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF43Q68DV7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.44■■□□□ 1.18
RNF43Q68DV7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF43Q68DV7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF43Q68DV7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.44■■□□□ 1.18
RNF43Q68DV7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RNF43Q68DV7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RNF43Q68DV7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.44■■□□□ 1.18
RNF43Q68DV7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF43Q68DV7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
RNF43Q68DV7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
RNF43Q68DV7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF43Q68DV7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF43Q68DV7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF43Q68DV7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF43Q68DV7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF43Q68DV7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
RNF43Q68DV7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.43■■□□□ 1.18
RNF43Q68DV7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.43■■□□□ 1.18
RNF43Q68DV7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.43■■□□□ 1.18
RNF43Q68DV7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
RNF43Q68DV7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.43■■□□□ 1.18
RNF43Q68DV7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF43Q68DV7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
RNF43Q68DV7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.43■■□□□ 1.18
RNF43Q68DV7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RNF43Q68DV7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.42■■□□□ 1.18
RNF43Q68DV7 OXCT2P1-201ENST00000447263 1535 ntBASIC22.42■■□□□ 1.18
RNF43Q68DV7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF43Q68DV7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.42■■□□□ 1.18
RNF43Q68DV7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RNF43Q68DV7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms