Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 AC009299.2-201ENST00000482477 511 ntBASIC20.57■□□□□ 0.88
RNF220Q5VTB9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 MTDHP2-201ENST00000601468 714 ntBASIC20.57■□□□□ 0.88
RNF220Q5VTB9 MIR4787-201ENST00000607364 84 ntBASIC20.57■□□□□ 0.88
RNF220Q5VTB9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RNF220Q5VTB9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RNF220Q5VTB9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF220Q5VTB9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF220Q5VTB9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF220Q5VTB9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF220Q5VTB9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF220Q5VTB9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF220Q5VTB9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF220Q5VTB9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF220Q5VTB9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
RNF220Q5VTB9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF220Q5VTB9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF220Q5VTB9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RNF220Q5VTB9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF220Q5VTB9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF220Q5VTB9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF220Q5VTB9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF220Q5VTB9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF220Q5VTB9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RNF220Q5VTB9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF220Q5VTB9 AL451085.2-201ENST00000605085 799 ntBASIC20.55■□□□□ 0.88
RNF220Q5VTB9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RNF220Q5VTB9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RNF220Q5VTB9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF220Q5VTB9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
RNF220Q5VTB9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF220Q5VTB9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF220Q5VTB9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF220Q5VTB9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF220Q5VTB9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 AC239859.2-201ENST00000444165 318 ntBASIC20.54■□□□□ 0.88
RNF220Q5VTB9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF220Q5VTB9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF220Q5VTB9 AC087289.5-201ENST00000586076 3175 ntBASIC20.53■□□□□ 0.88
RNF220Q5VTB9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF220Q5VTB9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
RNF220Q5VTB9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF220Q5VTB9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF220Q5VTB9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF220Q5VTB9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF220Q5VTB9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF220Q5VTB9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF220Q5VTB9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF220Q5VTB9 LINC01006-201ENST00000333319 2292 ntBASIC20.52■□□□□ 0.88
RNF220Q5VTB9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF220Q5VTB9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF220Q5VTB9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RNF220Q5VTB9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.52■□□□□ 0.88
RNF220Q5VTB9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
RNF220Q5VTB9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.52■□□□□ 0.87
RNF220Q5VTB9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RNF220Q5VTB9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RNF220Q5VTB9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.51■□□□□ 0.87
RNF220Q5VTB9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF220Q5VTB9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RNF220Q5VTB9 FP325331.1-202ENST00000623531 1380 ntBASIC20.51■□□□□ 0.87
RNF220Q5VTB9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF220Q5VTB9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF220Q5VTB9 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.51■□□□□ 0.87
RNF220Q5VTB9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF220Q5VTB9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF220Q5VTB9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF220Q5VTB9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms