Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRK2Q5S007 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRK2Q5S007 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRK2Q5S007 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRK2Q5S007 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRK2Q5S007 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRK2Q5S007 RPPH1-201ENST00000516869 333 ntBASIC18.94■□□□□ 0.62
LRRK2Q5S007 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.94■□□□□ 0.62
LRRK2Q5S007 AL359736.2-201ENST00000621992 437 ntBASIC18.94■□□□□ 0.62
LRRK2Q5S007 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.93■□□□□ 0.62
LRRK2Q5S007 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
LRRK2Q5S007 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRK2Q5S007 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.93■□□□□ 0.62
LRRK2Q5S007 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.93■□□□□ 0.62
LRRK2Q5S007 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRK2Q5S007 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRK2Q5S007 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRK2Q5S007 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRK2Q5S007 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRK2Q5S007 KRT18P20-201ENST00000548986 1279 ntBASIC18.93■□□□□ 0.62
LRRK2Q5S007 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
LRRK2Q5S007 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.93■□□□□ 0.62
LRRK2Q5S007 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRK2Q5S007 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.92■□□□□ 0.62
LRRK2Q5S007 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LRRK2Q5S007 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRK2Q5S007 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.92■□□□□ 0.62
LRRK2Q5S007 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.92■□□□□ 0.62
LRRK2Q5S007 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LRRK2Q5S007 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LRRK2Q5S007 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRK2Q5S007 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.92■□□□□ 0.62
LRRK2Q5S007 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRK2Q5S007 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRK2Q5S007 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.92■□□□□ 0.62
LRRK2Q5S007 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRK2Q5S007 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRK2Q5S007 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRK2Q5S007 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRK2Q5S007 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRK2Q5S007 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRK2Q5S007 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRK2Q5S007 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRK2Q5S007 RN7SL850P-201ENST00000579959 291 ntBASIC18.91■□□□□ 0.62
LRRK2Q5S007 AC069236.1-201ENST00000604339 616 ntBASIC18.91■□□□□ 0.62
LRRK2Q5S007 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRK2Q5S007 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRK2Q5S007 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRK2Q5S007 DUSP8P5-201ENST00000422884 1815 ntBASIC18.91■□□□□ 0.62
LRRK2Q5S007 AC010141.3-201ENST00000456659 717 ntBASIC18.91■□□□□ 0.62
LRRK2Q5S007 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
LRRK2Q5S007 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.9■□□□□ 0.62
LRRK2Q5S007 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRK2Q5S007 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.9■□□□□ 0.62
LRRK2Q5S007 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.9■□□□□ 0.62
LRRK2Q5S007 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LRRK2Q5S007 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.9■□□□□ 0.62
LRRK2Q5S007 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRK2Q5S007 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.9■□□□□ 0.62
LRRK2Q5S007 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRK2Q5S007 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.9■□□□□ 0.62
LRRK2Q5S007 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.9■□□□□ 0.62
LRRK2Q5S007 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.9■□□□□ 0.62
LRRK2Q5S007 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LRRK2Q5S007 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRK2Q5S007 AC138907.5-202ENST00000569484 235 ntBASIC18.89■□□□□ 0.61
LRRK2Q5S007 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRK2Q5S007 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRK2Q5S007 TMPOP1-202ENST00000424642 1267 ntBASIC18.89■□□□□ 0.61
LRRK2Q5S007 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.89■□□□□ 0.61
LRRK2Q5S007 AC012306.2-201ENST00000609350 630 ntBASIC18.89■□□□□ 0.61
LRRK2Q5S007 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.88■□□□□ 0.61
LRRK2Q5S007 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRK2Q5S007 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRK2Q5S007 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.88■□□□□ 0.61
LRRK2Q5S007 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LRRK2Q5S007 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRK2Q5S007 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRK2Q5S007 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRK2Q5S007 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRK2Q5S007 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.88■□□□□ 0.61
LRRK2Q5S007 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRK2Q5S007 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRK2Q5S007 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRK2Q5S007 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LRRK2Q5S007 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRK2Q5S007 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRK2Q5S007 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LRRK2Q5S007 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRK2Q5S007 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LRRK2Q5S007 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRK2Q5S007 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRK2Q5S007 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRK2Q5S007 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.87■□□□□ 0.61
LRRK2Q5S007 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.87■□□□□ 0.61
LRRK2Q5S007 CYP2T3P-201ENST00000601990 817 ntBASIC18.87■□□□□ 0.61
LRRK2Q5S007 AC142086.6-201ENST00000621154 1765 ntBASIC18.86■□□□□ 0.61
LRRK2Q5S007 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRK2Q5S007 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRK2Q5S007 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms