Protein–RNA interactions for Protein: Q5EBL8

PDZD11, PDZ domain-containing protein 11, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11Q5EBL8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDZD11Q5EBL8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.43■□□□□ 0.22
PDZD11Q5EBL8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.43■□□□□ 0.22
PDZD11Q5EBL8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDZD11Q5EBL8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDZD11Q5EBL8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.43■□□□□ 0.22
PDZD11Q5EBL8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PDZD11Q5EBL8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDZD11Q5EBL8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDZD11Q5EBL8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDZD11Q5EBL8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDZD11Q5EBL8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.43■□□□□ 0.22
PDZD11Q5EBL8 FEM1AP1-201ENST00000431297 1995 ntBASIC16.43■□□□□ 0.22
PDZD11Q5EBL8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDZD11Q5EBL8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDZD11Q5EBL8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PDZD11Q5EBL8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PDZD11Q5EBL8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 AC244015.2-201ENST00000616358 1861 ntBASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 SUZ12P1-203ENST00000578195 985 ntBASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDZD11Q5EBL8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDZD11Q5EBL8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PDZD11Q5EBL8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PDZD11Q5EBL8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDZD11Q5EBL8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDZD11Q5EBL8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDZD11Q5EBL8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDZD11Q5EBL8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDZD11Q5EBL8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.41■□□□□ 0.22
PDZD11Q5EBL8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDZD11Q5EBL8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.41■□□□□ 0.22
PDZD11Q5EBL8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDZD11Q5EBL8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDZD11Q5EBL8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDZD11Q5EBL8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.41■□□□□ 0.22
PDZD11Q5EBL8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDZD11Q5EBL8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 AC098818.2-201ENST00000564925 2320 ntBASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 FEM1AP4-201ENST00000443167 1987 ntBASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDZD11Q5EBL8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
PDZD11Q5EBL8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.39■□□□□ 0.21
PDZD11Q5EBL8 AC018445.3-201ENST00000624177 1945 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 487.1 ms