Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FNDC3BQ53EP0 AC026185.1-201ENST00000445748 174 ntBASIC21.76■■□□□ 1.07
FNDC3BQ53EP0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.76■■□□□ 1.07
FNDC3BQ53EP0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.76■■□□□ 1.07
FNDC3BQ53EP0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FNDC3BQ53EP0 AP001160.3-201ENST00000601484 763 ntBASIC21.76■■□□□ 1.07
FNDC3BQ53EP0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FNDC3BQ53EP0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 RAP2CP1-201ENST00000605103 478 ntBASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3BQ53EP0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3BQ53EP0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
FNDC3BQ53EP0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
FNDC3BQ53EP0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3BQ53EP0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.74■■□□□ 1.07
FNDC3BQ53EP0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
FNDC3BQ53EP0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.74■■□□□ 1.07
FNDC3BQ53EP0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3BQ53EP0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.74■■□□□ 1.07
FNDC3BQ53EP0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3BQ53EP0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3BQ53EP0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3BQ53EP0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3BQ53EP0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.73■■□□□ 1.07
FNDC3BQ53EP0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FNDC3BQ53EP0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.73■■□□□ 1.07
FNDC3BQ53EP0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
FNDC3BQ53EP0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.73■■□□□ 1.07
FNDC3BQ53EP0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.73■■□□□ 1.07
FNDC3BQ53EP0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.73■■□□□ 1.07
FNDC3BQ53EP0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.73■■□□□ 1.07
FNDC3BQ53EP0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.73■■□□□ 1.07
FNDC3BQ53EP0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.73■■□□□ 1.07
FNDC3BQ53EP0 UBE2DNL-204ENST00000602536 740 ntBASIC21.73■■□□□ 1.07
FNDC3BQ53EP0 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.73■■□□□ 1.07
FNDC3BQ53EP0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.73■■□□□ 1.07
FNDC3BQ53EP0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
FNDC3BQ53EP0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FNDC3BQ53EP0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FNDC3BQ53EP0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
FNDC3BQ53EP0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
FNDC3BQ53EP0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
FNDC3BQ53EP0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.72■■□□□ 1.07
FNDC3BQ53EP0 AP006587.3-201ENST00000525742 1516 ntBASIC21.72■■□□□ 1.07
FNDC3BQ53EP0 AC006970.2-201ENST00000450065 779 ntBASIC21.72■■□□□ 1.07
FNDC3BQ53EP0 MFSD11-216ENST00000590393 1141 ntBASIC21.72■■□□□ 1.07
FNDC3BQ53EP0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FNDC3BQ53EP0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FNDC3BQ53EP0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FNDC3BQ53EP0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.71■■□□□ 1.07
FNDC3BQ53EP0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FNDC3BQ53EP0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FNDC3BQ53EP0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.71■■□□□ 1.07
FNDC3BQ53EP0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FNDC3BQ53EP0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
FNDC3BQ53EP0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
FNDC3BQ53EP0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.71■■□□□ 1.07
FNDC3BQ53EP0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FNDC3BQ53EP0 HLA-L-209ENST00000420110 1011 ntBASIC21.71■■□□□ 1.07
FNDC3BQ53EP0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.71■■□□□ 1.07
FNDC3BQ53EP0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
FNDC3BQ53EP0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FNDC3BQ53EP0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
FNDC3BQ53EP0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.7■■□□□ 1.07
FNDC3BQ53EP0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
FNDC3BQ53EP0 AC139530.1-201ENST00000575312 1977 ntBASIC21.7■■□□□ 1.07
FNDC3BQ53EP0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FNDC3BQ53EP0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FNDC3BQ53EP0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.7■■□□□ 1.06
FNDC3BQ53EP0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.7■■□□□ 1.06
FNDC3BQ53EP0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FNDC3BQ53EP0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.7■■□□□ 1.06
FNDC3BQ53EP0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.7■■□□□ 1.06
FNDC3BQ53EP0 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.7■■□□□ 1.06
FNDC3BQ53EP0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FNDC3BQ53EP0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FNDC3BQ53EP0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FNDC3BQ53EP0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
FNDC3BQ53EP0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.69■■□□□ 1.06
FNDC3BQ53EP0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FNDC3BQ53EP0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.69■■□□□ 1.06
FNDC3BQ53EP0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms