Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 LINC01960-201ENST00000563759 1884 ntBASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 C11orf96-202ENST00000528572 1834 ntBASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KHDC1Q4VXA5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
KHDC1Q4VXA5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
KHDC1Q4VXA5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
KHDC1Q4VXA5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KHDC1Q4VXA5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.66■■□□□ 1.06
KHDC1Q4VXA5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KHDC1Q4VXA5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.66■■□□□ 1.06
KHDC1Q4VXA5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.66■■□□□ 1.06
KHDC1Q4VXA5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
KHDC1Q4VXA5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.66■■□□□ 1.06
KHDC1Q4VXA5 AC087742.1-201ENST00000575880 1738 ntBASIC21.66■■□□□ 1.06
KHDC1Q4VXA5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KHDC1Q4VXA5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KHDC1Q4VXA5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.65■■□□□ 1.06
KHDC1Q4VXA5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
KHDC1Q4VXA5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
KHDC1Q4VXA5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.65■■□□□ 1.06
KHDC1Q4VXA5 AP005435.1-201ENST00000529293 1178 ntBASIC21.65■■□□□ 1.06
KHDC1Q4VXA5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KHDC1Q4VXA5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KHDC1Q4VXA5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
KHDC1Q4VXA5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KHDC1Q4VXA5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.65■■□□□ 1.06
KHDC1Q4VXA5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KHDC1Q4VXA5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.65■■□□□ 1.06
KHDC1Q4VXA5 AC026310.3-201ENST00000625186 2373 ntBASIC21.65■■□□□ 1.06
KHDC1Q4VXA5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
KHDC1Q4VXA5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KHDC1Q4VXA5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
KHDC1Q4VXA5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
KHDC1Q4VXA5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KHDC1Q4VXA5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KHDC1Q4VXA5 TSPY26P-201ENST00000476365 1326 ntBASIC21.64■■□□□ 1.05
KHDC1Q4VXA5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
KHDC1Q4VXA5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
KHDC1Q4VXA5 IGHV3-19-201ENST00000521488 291 ntBASIC21.64■■□□□ 1.05
KHDC1Q4VXA5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KHDC1Q4VXA5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
KHDC1Q4VXA5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.64■■□□□ 1.05
KHDC1Q4VXA5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KHDC1Q4VXA5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
KHDC1Q4VXA5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.64■■□□□ 1.05
KHDC1Q4VXA5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KHDC1Q4VXA5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
KHDC1Q4VXA5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KHDC1Q4VXA5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 AC139530.1-201ENST00000575312 1977 ntBASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.63■■□□□ 1.05
KHDC1Q4VXA5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
KHDC1Q4VXA5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms