Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ID1-201ENST00000376105 1233 ntBASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 BX842568.3-201ENST00000418104 571 ntBASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 YBX1P1-201ENST00000445822 960 ntBASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRFAM7AQ494W8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CHRFAM7AQ494W8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CHRFAM7AQ494W8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CHRFAM7AQ494W8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRFAM7AQ494W8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRFAM7AQ494W8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRFAM7AQ494W8 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.66■□□□□ 0.58
CHRFAM7AQ494W8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CHRFAM7AQ494W8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRFAM7AQ494W8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CHRFAM7AQ494W8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRFAM7AQ494W8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRFAM7AQ494W8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRFAM7AQ494W8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRFAM7AQ494W8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRFAM7AQ494W8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRFAM7AQ494W8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRFAM7AQ494W8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRFAM7AQ494W8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.65■□□□□ 0.58
CHRFAM7AQ494W8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CHRFAM7AQ494W8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRFAM7AQ494W8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CHRFAM7AQ494W8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRFAM7AQ494W8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.65■□□□□ 0.58
CHRFAM7AQ494W8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.65■□□□□ 0.58
CHRFAM7AQ494W8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.65■□□□□ 0.58
CHRFAM7AQ494W8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRFAM7AQ494W8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRFAM7AQ494W8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRFAM7AQ494W8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRFAM7AQ494W8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHRFAM7AQ494W8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRFAM7AQ494W8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.64■□□□□ 0.57
CHRFAM7AQ494W8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRFAM7AQ494W8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRFAM7AQ494W8 AC004911.1-201ENST00000416316 871 ntBASIC18.64■□□□□ 0.57
CHRFAM7AQ494W8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.64■□□□□ 0.57
CHRFAM7AQ494W8 AC126544.1-201ENST00000580842 1059 ntBASIC18.64■□□□□ 0.57
CHRFAM7AQ494W8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.64■□□□□ 0.57
CHRFAM7AQ494W8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.64■□□□□ 0.57
CHRFAM7AQ494W8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRFAM7AQ494W8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRFAM7AQ494W8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.64■□□□□ 0.57
CHRFAM7AQ494W8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRFAM7AQ494W8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHRFAM7AQ494W8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 AL137060.1-201ENST00000618151 2648 ntBASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 FBXW4P1-201ENST00000426721 2239 ntBASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 AC009102.2-201ENST00000606772 1639 ntBASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRFAM7AQ494W8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRFAM7AQ494W8 AC080038.3-201ENST00000623346 1952 ntBASIC18.62■□□□□ 0.57
CHRFAM7AQ494W8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHRFAM7AQ494W8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRFAM7AQ494W8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRFAM7AQ494W8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms