Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
HLA-BQ31612 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21■□□□□ 0.95
HLA-BQ31612 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-BQ31612 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
HLA-BQ31612 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-BQ31612 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-BQ31612 OR7E47P-201ENST00000546390 1422 ntBASIC20.99■□□□□ 0.95
HLA-BQ31612 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-BQ31612 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.99■□□□□ 0.95
HLA-BQ31612 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-BQ31612 MIPEPP3-201ENST00000412105 444 ntBASIC20.99■□□□□ 0.95
HLA-BQ31612 POU5F1P3-201ENST00000428824 1078 ntBASIC20.99■□□□□ 0.95
HLA-BQ31612 CYP2T1P-201ENST00000432607 1285 ntBASIC20.99■□□□□ 0.95
HLA-BQ31612 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
HLA-BQ31612 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.99■□□□□ 0.95
HLA-BQ31612 AC008687.6-201ENST00000596318 630 ntBASIC20.99■□□□□ 0.95
HLA-BQ31612 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.99■□□□□ 0.95
HLA-BQ31612 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-BQ31612 MKRN4P-201ENST00000444706 1521 ntBASIC20.99■□□□□ 0.95
HLA-BQ31612 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.98■□□□□ 0.95
HLA-BQ31612 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-BQ31612 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-BQ31612 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.98■□□□□ 0.95
HLA-BQ31612 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-BQ31612 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.98■□□□□ 0.95
HLA-BQ31612 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.98■□□□□ 0.95
HLA-BQ31612 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.98■□□□□ 0.95
HLA-BQ31612 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-BQ31612 RNA5SP413-201ENST00000516373 109 ntBASIC20.98■□□□□ 0.95
HLA-BQ31612 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-BQ31612 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-BQ31612 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-BQ31612 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-BQ31612 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-BQ31612 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HLA-BQ31612 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-BQ31612 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-BQ31612 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HLA-BQ31612 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-BQ31612 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-BQ31612 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.97■□□□□ 0.95
HLA-BQ31612 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
HLA-BQ31612 AC093827.2-201ENST00000512654 315 ntBASIC20.97■□□□□ 0.95
HLA-BQ31612 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HLA-BQ31612 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.97■□□□□ 0.95
HLA-BQ31612 EEF1DP3-203ENST00000566025 782 ntBASIC20.97■□□□□ 0.95
HLA-BQ31612 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-BQ31612 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.97■□□□□ 0.95
HLA-BQ31612 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.97■□□□□ 0.95
HLA-BQ31612 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.97■□□□□ 0.95
HLA-BQ31612 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-BQ31612 AC092068.2-201ENST00000590491 1708 ntBASIC20.97■□□□□ 0.95
HLA-BQ31612 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-BQ31612 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-BQ31612 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-BQ31612 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.97■□□□□ 0.95
HLA-BQ31612 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.97■□□□□ 0.95
HLA-BQ31612 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HLA-BQ31612 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.96■□□□□ 0.95
HLA-BQ31612 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-BQ31612 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-BQ31612 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.96■□□□□ 0.95
HLA-BQ31612 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.96■□□□□ 0.95
HLA-BQ31612 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.96■□□□□ 0.95
HLA-BQ31612 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-BQ31612 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.96■□□□□ 0.95
HLA-BQ31612 AL034346.1-201ENST00000568244 1277 ntBASIC20.96■□□□□ 0.95
HLA-BQ31612 AC053503.5-201ENST00000601508 636 ntBASIC20.96■□□□□ 0.95
HLA-BQ31612 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.96■□□□□ 0.95
HLA-BQ31612 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-BQ31612 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.95■□□□□ 0.94
HLA-BQ31612 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-BQ31612 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-BQ31612 KRT18P29-201ENST00000397031 1267 ntBASIC20.95■□□□□ 0.94
HLA-BQ31612 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
HLA-BQ31612 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-BQ31612 AC007322.4-201ENST00000509611 723 ntBASIC20.95■□□□□ 0.94
HLA-BQ31612 ITM2C-210ENST00000620962 501 ntBASIC20.95■□□□□ 0.94
HLA-BQ31612 OR10C1-204ENST00000622521 1039 ntBASIC20.95■□□□□ 0.94
HLA-BQ31612 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-BQ31612 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-BQ31612 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-BQ31612 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HLA-BQ31612 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-BQ31612 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
HLA-BQ31612 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HLA-BQ31612 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-BQ31612 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-BQ31612 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-BQ31612 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-BQ31612 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
HLA-BQ31612 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-BQ31612 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-BQ31612 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-BQ31612 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-BQ31612 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-BQ31612 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-BQ31612 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-BQ31612 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-BQ31612 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms