Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.29■■□□□ 1
SF3A2Q15428 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.29■■□□□ 1
SF3A2Q15428 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.29■■□□□ 1
SF3A2Q15428 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SF3A2Q15428 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SF3A2Q15428 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.29■■□□□ 1
SF3A2Q15428 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.29■■□□□ 1
SF3A2Q15428 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SF3A2Q15428 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SF3A2Q15428 AP003733.4-201ENST00000623785 1697 ntBASIC21.28■■□□□ 1
SF3A2Q15428 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.28■■□□□ 1
SF3A2Q15428 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.28■■□□□ 1
SF3A2Q15428 AC079630.1-202ENST00000618127 1840 ntBASIC21.28■■□□□ 1
SF3A2Q15428 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.28■■□□□ 1
SF3A2Q15428 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.28■■□□□ 1
SF3A2Q15428 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.28■■□□□ 1
SF3A2Q15428 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SF3A2Q15428 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.28■■□□□ 1
SF3A2Q15428 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.28■■□□□ 1
SF3A2Q15428 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.28■■□□□ 1
SF3A2Q15428 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.28■■□□□ 1
SF3A2Q15428 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.28■■□□□ 1
SF3A2Q15428 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.28■■□□□ 1
SF3A2Q15428 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SF3A2Q15428 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.27■■□□□ 1
SF3A2Q15428 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
SF3A2Q15428 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SF3A2Q15428 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.27■■□□□ 1
SF3A2Q15428 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.27■■□□□ 1
SF3A2Q15428 ESRRAP1-201ENST00000400596 1257 ntBASIC21.27■■□□□ 1
SF3A2Q15428 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SF3A2Q15428 CYP2T1P-201ENST00000432607 1285 ntBASIC21.27■■□□□ 1
SF3A2Q15428 RPS2P4-201ENST00000476944 856 ntBASIC21.27■■□□□ 1
SF3A2Q15428 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.27■■□□□ 1
SF3A2Q15428 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SF3A2Q15428 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SF3A2Q15428 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
SF3A2Q15428 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SF3A2Q15428 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SF3A2Q15428 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SF3A2Q15428 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SF3A2Q15428 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SF3A2Q15428 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
SF3A2Q15428 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SF3A2Q15428 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SF3A2Q15428 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.26■□□□□ 0.99
SF3A2Q15428 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.26■□□□□ 0.99
SF3A2Q15428 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SF3A2Q15428 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SF3A2Q15428 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SF3A2Q15428 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SF3A2Q15428 AC022211.4-201ENST00000625094 2161 ntBASIC21.26■□□□□ 0.99
SF3A2Q15428 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SF3A2Q15428 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SF3A2Q15428 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SF3A2Q15428 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SF3A2Q15428 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SF3A2Q15428 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SF3A2Q15428 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SF3A2Q15428 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SF3A2Q15428 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.25■□□□□ 0.99
SF3A2Q15428 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SF3A2Q15428 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.25■□□□□ 0.99
SF3A2Q15428 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.25■□□□□ 0.99
SF3A2Q15428 AC068338.2-201ENST00000563278 1430 ntBASIC21.25■□□□□ 0.99
SF3A2Q15428 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.25■□□□□ 0.99
SF3A2Q15428 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SF3A2Q15428 AC013268.1-206ENST00000638368 961 ntBASIC21.25■□□□□ 0.99
SF3A2Q15428 AC112229.1-201ENST00000639295 961 ntBASIC21.25■□□□□ 0.99
SF3A2Q15428 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SF3A2Q15428 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
SF3A2Q15428 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SF3A2Q15428 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SF3A2Q15428 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SF3A2Q15428 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SF3A2Q15428 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.24■□□□□ 0.99
SF3A2Q15428 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.24■□□□□ 0.99
SF3A2Q15428 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SF3A2Q15428 AC142381.4-202ENST00000563973 229 ntBASIC21.24■□□□□ 0.99
SF3A2Q15428 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SF3A2Q15428 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SF3A2Q15428 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SF3A2Q15428 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SF3A2Q15428 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SF3A2Q15428 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SF3A2Q15428 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SF3A2Q15428 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SF3A2Q15428 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SF3A2Q15428 AC010141.2-201ENST00000452426 721 ntBASIC21.23■□□□□ 0.99
SF3A2Q15428 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SF3A2Q15428 AC006058.3-201ENST00000606217 1069 ntBASIC21.23■□□□□ 0.99
SF3A2Q15428 AC083880.1-201ENST00000608266 535 ntBASIC21.23■□□□□ 0.99
SF3A2Q15428 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.23■□□□□ 0.99
SF3A2Q15428 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SF3A2Q15428 AL139125.2-201ENST00000623134 1869 ntBASIC21.23■□□□□ 0.99
SF3A2Q15428 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SF3A2Q15428 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SF3A2Q15428 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.23■□□□□ 0.99
SF3A2Q15428 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SF3A2Q15428 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms