Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB40BQ12829 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RAB40BQ12829 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40BQ12829 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40BQ12829 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40BQ12829 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40BQ12829 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40BQ12829 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RAB40BQ12829 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40BQ12829 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40BQ12829 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.21■□□□□ 0.67
RAB40BQ12829 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40BQ12829 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40BQ12829 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB40BQ12829 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40BQ12829 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB40BQ12829 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40BQ12829 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40BQ12829 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40BQ12829 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40BQ12829 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RAB40BQ12829 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40BQ12829 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40BQ12829 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB40BQ12829 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40BQ12829 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40BQ12829 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40BQ12829 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB40BQ12829 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40BQ12829 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40BQ12829 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RAB40BQ12829 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB40BQ12829 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB40BQ12829 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RAB40BQ12829 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40BQ12829 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB40BQ12829 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40BQ12829 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB40BQ12829 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40BQ12829 AL031602.1-201ENST00000633169 911 ntBASIC19.19■□□□□ 0.66
RAB40BQ12829 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40BQ12829 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40BQ12829 AL121603.2-201ENST00000557373 2117 ntBASIC19.19■□□□□ 0.66
RAB40BQ12829 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.19■□□□□ 0.66
RAB40BQ12829 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40BQ12829 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RAB40BQ12829 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB40BQ12829 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40BQ12829 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.18■□□□□ 0.66
RAB40BQ12829 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB40BQ12829 AL031848.2-201ENST00000607670 837 ntBASIC19.18■□□□□ 0.66
RAB40BQ12829 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB40BQ12829 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB40BQ12829 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40BQ12829 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40BQ12829 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40BQ12829 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB40BQ12829 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RAB40BQ12829 OR7E47P-201ENST00000546390 1422 ntBASIC19.17■□□□□ 0.66
RAB40BQ12829 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40BQ12829 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40BQ12829 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RAB40BQ12829 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40BQ12829 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40BQ12829 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB40BQ12829 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
RAB40BQ12829 BX664725.1-201ENST00000438252 379 ntBASIC19.17■□□□□ 0.66
RAB40BQ12829 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.17■□□□□ 0.66
RAB40BQ12829 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.17■□□□□ 0.66
RAB40BQ12829 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.17■□□□□ 0.66
RAB40BQ12829 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RAB40BQ12829 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40BQ12829 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RAB40BQ12829 KRT8P33-201ENST00000508125 1423 ntBASIC19.17■□□□□ 0.66
RAB40BQ12829 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
RAB40BQ12829 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RAB40BQ12829 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB40BQ12829 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40BQ12829 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40BQ12829 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40BQ12829 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40BQ12829 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
RAB40BQ12829 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB40BQ12829 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RAB40BQ12829 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40BQ12829 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40BQ12829 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40BQ12829 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40BQ12829 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40BQ12829 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB40BQ12829 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB40BQ12829 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40BQ12829 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40BQ12829 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
RAB40BQ12829 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.15■□□□□ 0.66
RAB40BQ12829 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40BQ12829 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40BQ12829 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB40BQ12829 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40BQ12829 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms