Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 YDR355CYDR355C 303 nt3.57□□□□□ -1.84
RPN9Q04062 YER138W-AYER138W-A 105 nt3.57□□□□□ -1.84
RPN9Q04062 SUP56tL(CAA)A 82 nt3.57□□□□□ -1.84
RPN9Q04062 SUP53tL(CAA)C 82 nt3.57□□□□□ -1.84
RPN9Q04062 tL(CAA)DtL(CAA)D 82 nt3.57□□□□□ -1.84
RPN9Q04062 tL(CAA)G1tL(CAA)G1 82 nt3.57□□□□□ -1.84
RPN9Q04062 SUP54tL(CAA)G2 82 nt3.57□□□□□ -1.84
RPN9Q04062 tL(CAA)G3tL(CAA)G3 82 nt3.57□□□□□ -1.84
RPN9Q04062 tL(CAA)KtL(CAA)K 82 nt3.57□□□□□ -1.84
RPN9Q04062 tL(CAA)LtL(CAA)L 82 nt3.57□□□□□ -1.84
RPN9Q04062 tL(CAA)MtL(CAA)M 82 nt3.57□□□□□ -1.84
RPN9Q04062 tL(CAA)NtL(CAA)N 82 nt3.57□□□□□ -1.84
RPN9Q04062 ARI1YGL157W 1044 nt3.57□□□□□ -1.84
RPN9Q04062 YIL156W-AYIL156W-A 402 nt3.57□□□□□ -1.84
RPN9Q04062 YKL162CYKL162C 1209 nt3.57□□□□□ -1.84
RPN9Q04062 REH1YLR387C 1299 nt3.57□□□□□ -1.84
RPN9Q04062 MTG1YMR097C 1104 nt3.57□□□□□ -1.84
RPN9Q04062 MRPS8YMR158W 468 nt3.57□□□□□ -1.84
RPN9Q04062 SLM2YNL047C 1971 nt3.57□□□□□ -1.84
RPN9Q04062 COS1YNL336W 1146 nt3.57□□□□□ -1.84
RPN9Q04062 MNT4YNR059W 1743 nt3.57□□□□□ -1.84
RPN9Q04062 YBL107W-AYBL107W-A 105 nt3.57□□□□□ -1.84
RPN9Q04062 PNG1YPL096W 1092 nt3.57□□□□□ -1.84
RPN9Q04062 snR17asnR17a 333 nt3.57□□□□□ -1.84
RPN9Q04062 DIB1YPR082C 432 nt3.57□□□□□ -1.84
RPN9Q04062 MDN1YLR106C 14733 nt3.57□□□□□ -1.84
RPN9Q04062 ACK1YDL203C 1872 nt3.56□□□□□ -1.84
RPN9Q04062 MAL12YGR292W 1755 nt3.56□□□□□ -1.84
RPN9Q04062 MAL32YBR299W 1755 nt3.56□□□□□ -1.84
RPN9Q04062 TAF1YGR274C 3201 nt3.56□□□□□ -1.84
RPN9Q04062 ERJ5YFR041C 888 nt3.56□□□□□ -1.84
RPN9Q04062 PDX1YGR193C 1233 nt3.56□□□□□ -1.84
RPN9Q04062 ARG3YJL088W 1017 nt3.56□□□□□ -1.84
RPN9Q04062 SOP4YJL192C 705 nt3.56□□□□□ -1.84
RPN9Q04062 YAR075WYAR075W 474 nt3.56□□□□□ -1.84
RPN9Q04062 RIF2YLR453C 1188 nt3.56□□□□□ -1.84
RPN9Q04062 ATG19YOL082W 1248 nt3.56□□□□□ -1.84
RPN9Q04062 SUR1YPL057C 1149 nt3.56□□□□□ -1.84
RPN9Q04062 MSS4YDR208W 2340 nt3.56□□□□□ -1.84
RPN9Q04062 APE2YKL157W 2859 nt3.56□□□□□ -1.84
RPN9Q04062 CAF130YGR134W 3369 nt3.55□□□□□ -1.84
RPN9Q04062 YOR022CYOR022C 2148 nt3.55□□□□□ -1.84
RPN9Q04062 BCS1YDR375C 1371 nt3.55□□□□□ -1.84
RPN9Q04062 KAP95YLR347C 2586 nt3.55□□□□□ -1.84
RPN9Q04062 NHP10YDL002C 612 nt3.55□□□□□ -1.84
RPN9Q04062 TLG1YDR468C 675 nt3.55□□□□□ -1.84
RPN9Q04062 IZH1YDR492W 951 nt3.55□□□□□ -1.84
RPN9Q04062 YPT35YHR105W 645 nt3.55□□□□□ -1.84
RPN9Q04062 TMA19YKL056C 504 nt3.55□□□□□ -1.84
RPN9Q04062 MOH1YBL049W 417 nt3.55□□□□□ -1.84
RPN9Q04062 RIB4YOL143C 510 nt3.55□□□□□ -1.84
RPN9Q04062 MRP2YPR166C 348 nt3.55□□□□□ -1.84
RPN9Q04062 BYE1YKL005C 1785 nt3.54□□□□□ -1.84
RPN9Q04062 KAR1YNL188W 1302 nt3.54□□□□□ -1.84
RPN9Q04062 RPS29BYDL061C 171 nt3.54□□□□□ -1.84
RPN9Q04062 FIP1YJR093C 984 nt3.54□□□□□ -1.84
RPN9Q04062 YJR111CYJR111C 852 nt3.54□□□□□ -1.84
RPN9Q04062 ENT3YJR125C 1227 nt3.54□□□□□ -1.84
RPN9Q04062 HYM1YKL189W 1200 nt3.54□□□□□ -1.84
RPN9Q04062 YOL038C-AYOL038C-A 96 nt3.54□□□□□ -1.84
RPN9Q04062 RRP36YOR287C 903 nt3.54□□□□□ -1.84
RPN9Q04062 ATG5YPL149W 885 nt3.54□□□□□ -1.84
RPN9Q04062 YBR089WYBR089W 600 nt3.54□□□□□ -1.84
RPN9Q04062 MRH4YGL064C 1686 nt3.54□□□□□ -1.84
RPN9Q04062 SEA4YBL104C 3117 nt3.54□□□□□ -1.84
RPN9Q04062 SPA2YLL021W 4401 nt3.53□□□□□ -1.84
RPN9Q04062 AHP1YLR109W 531 nt3.53□□□□□ -1.84
RPN9Q04062 RIM11YMR139W 1113 nt3.53□□□□□ -1.84
RPN9Q04062 YNL035CYNL035C 1170 nt3.53□□□□□ -1.84
RPN9Q04062 YIP3YNL044W 531 nt3.53□□□□□ -1.84
RPN9Q04062 YPR136CYPR136C 513 nt3.53□□□□□ -1.84
RPN9Q04062 JEN1YKL217W 1851 nt3.53□□□□□ -1.84
RPN9Q04062 YLR352WYLR352W 2424 nt3.53□□□□□ -1.84
RPN9Q04062 TEC1YBR083W 1461 nt3.53□□□□□ -1.84
RPN9Q04062 URA2YJL130C 6645 nt3.53□□□□□ -1.85
RPN9Q04062 ALA1YOR335C 2877 nt3.53□□□□□ -1.85
RPN9Q04062 snR78snR78 87 nt3.52□□□□□ -1.85
RPN9Q04062 AML1YGR001C 747 nt3.52□□□□□ -1.85
RPN9Q04062 SPT4YGR063C 309 nt3.52□□□□□ -1.85
RPN9Q04062 YIR014WYIR014W 729 nt3.52□□□□□ -1.85
RPN9Q04062 ALB1YJL122W 528 nt3.52□□□□□ -1.85
RPN9Q04062 ARC19YKL013C 516 nt3.52□□□□□ -1.85
RPN9Q04062 CSH1YBR161W 1131 nt3.52□□□□□ -1.85
RPN9Q04062 CPA2YJR109C 3357 nt3.52□□□□□ -1.85
RPN9Q04062 YHR214C-EYHR214C-E 300 nt3.51□□□□□ -1.85
RPN9Q04062 DCG1YIR030C 735 nt3.51□□□□□ -1.85
RPN9Q04062 SOD1YJR104C 465 nt3.51□□□□□ -1.85
RPN9Q04062 SED5YLR026C 1023 nt3.51□□□□□ -1.85
RPN9Q04062 YLR163W-AYLR163W-A 114 nt3.51□□□□□ -1.85
RPN9Q04062 YAR070CYAR070C 300 nt3.51□□□□□ -1.85
RPN9Q04062 YMR310CYMR310C 954 nt3.51□□□□□ -1.85
RPN9Q04062 TIR2YOR010C 756 nt3.51□□□□□ -1.85
RPN9Q04062 SYC1YOR179C 567 nt3.51□□□□□ -1.85
RPN9Q04062 FDH1YOR388C 1131 nt3.51□□□□□ -1.85
RPN9Q04062 VPS53YJL029C 2469 nt3.51□□□□□ -1.85
RPN9Q04062 RPA135YPR010C 3612 nt3.5□□□□□ -1.85
RPN9Q04062 LCB5YLR260W 2064 nt3.5□□□□□ -1.85
RPN9Q04062 EXO70YJL085W 1872 nt3.5□□□□□ -1.85
RPN9Q04062 HDA2YDR295C 2025 nt3.5□□□□□ -1.85
RPN9Q04062 SIN4YNL236W 2925 nt3.5□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 21.2 ms