Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HSPG2P98160 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HSPG2P98160 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HSPG2P98160 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HSPG2P98160 CYP2T3P-201ENST00000601990 817 ntBASIC13.54□□□□□ -0.24
HSPG2P98160 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.54□□□□□ -0.24
HSPG2P98160 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.54□□□□□ -0.24
HSPG2P98160 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HSPG2P98160 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HSPG2P98160 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HSPG2P98160 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.54□□□□□ -0.24
HSPG2P98160 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.54□□□□□ -0.24
HSPG2P98160 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HSPG2P98160 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HSPG2P98160 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.53□□□□□ -0.24
HSPG2P98160 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC13.53□□□□□ -0.24
HSPG2P98160 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC13.53□□□□□ -0.24
HSPG2P98160 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HSPG2P98160 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
HSPG2P98160 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HSPG2P98160 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.53□□□□□ -0.24
HSPG2P98160 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.53□□□□□ -0.24
HSPG2P98160 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.53□□□□□ -0.24
HSPG2P98160 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HSPG2P98160 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HSPG2P98160 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HSPG2P98160 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC13.53□□□□□ -0.24
HSPG2P98160 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HSPG2P98160 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.53□□□□□ -0.24
HSPG2P98160 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.53□□□□□ -0.24
HSPG2P98160 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.53□□□□□ -0.24
HSPG2P98160 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HSPG2P98160 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.53□□□□□ -0.24
HSPG2P98160 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC13.53□□□□□ -0.24
HSPG2P98160 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HSPG2P98160 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HSPG2P98160 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HSPG2P98160 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.53□□□□□ -0.24
HSPG2P98160 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HSPG2P98160 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HSPG2P98160 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HSPG2P98160 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HSPG2P98160 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.53□□□□□ -0.24
HSPG2P98160 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.53□□□□□ -0.24
HSPG2P98160 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HSPG2P98160 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HSPG2P98160 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.53□□□□□ -0.24
HSPG2P98160 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
HSPG2P98160 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HSPG2P98160 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HSPG2P98160 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HSPG2P98160 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.52□□□□□ -0.24
HSPG2P98160 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HSPG2P98160 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
HSPG2P98160 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.52□□□□□ -0.24
HSPG2P98160 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.52□□□□□ -0.24
HSPG2P98160 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC13.52□□□□□ -0.24
HSPG2P98160 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC13.52□□□□□ -0.24
HSPG2P98160 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HSPG2P98160 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.52□□□□□ -0.25
HSPG2P98160 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
HSPG2P98160 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HSPG2P98160 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.52□□□□□ -0.25
HSPG2P98160 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.52□□□□□ -0.25
HSPG2P98160 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.52□□□□□ -0.25
HSPG2P98160 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HSPG2P98160 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HSPG2P98160 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.52□□□□□ -0.25
HSPG2P98160 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HSPG2P98160 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
HSPG2P98160 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.52□□□□□ -0.25
HSPG2P98160 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HSPG2P98160 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.52□□□□□ -0.25
HSPG2P98160 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HSPG2P98160 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HSPG2P98160 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HSPG2P98160 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HSPG2P98160 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.51□□□□□ -0.25
HSPG2P98160 RPPH1-201ENST00000516869 333 ntBASIC13.51□□□□□ -0.25
HSPG2P98160 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HSPG2P98160 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.51□□□□□ -0.25
HSPG2P98160 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HSPG2P98160 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC13.51□□□□□ -0.25
HSPG2P98160 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HSPG2P98160 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HSPG2P98160 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
HSPG2P98160 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.51□□□□□ -0.25
HSPG2P98160 KRT18P35-201ENST00000510488 1269 ntBASIC13.51□□□□□ -0.25
HSPG2P98160 KRT18P20-201ENST00000548986 1279 ntBASIC13.51□□□□□ -0.25
HSPG2P98160 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HSPG2P98160 SHF-206ENST00000560471 2499 ntTSL 5 BASIC13.51□□□□□ -0.25
HSPG2P98160 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC13.51□□□□□ -0.25
HSPG2P98160 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC13.51□□□□□ -0.25
HSPG2P98160 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HSPG2P98160 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HSPG2P98160 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.5□□□□□ -0.25
HSPG2P98160 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.5□□□□□ -0.25
HSPG2P98160 AC138907.5-202ENST00000569484 235 ntBASIC13.5□□□□□ -0.25
HSPG2P98160 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HSPG2P98160 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms