Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL20P78556 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL20P78556 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL20P78556 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL20P78556 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL20P78556 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL20P78556 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL20P78556 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL20P78556 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL20P78556 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.9■□□□□ 0.3
CCL20P78556 AC016575.1-201ENST00000607026 382 ntBASIC16.9■□□□□ 0.3
CCL20P78556 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL20P78556 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL20P78556 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL20P78556 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL20P78556 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL20P78556 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCL20P78556 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
CCL20P78556 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCL20P78556 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.89■□□□□ 0.29
CCL20P78556 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCL20P78556 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCL20P78556 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCL20P78556 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL20P78556 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL20P78556 AC087393.1-201ENST00000582896 145 ntBASIC16.89■□□□□ 0.29
CCL20P78556 CA15P2-201ENST00000611168 834 ntBASIC16.89■□□□□ 0.29
CCL20P78556 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CCL20P78556 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL20P78556 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCL20P78556 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL20P78556 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.89■□□□□ 0.29
CCL20P78556 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL20P78556 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL20P78556 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CCL20P78556 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL20P78556 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL20P78556 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL20P78556 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL20P78556 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CCL20P78556 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL20P78556 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCL20P78556 AC011551.1-201ENST00000614101 683 ntBASIC16.88■□□□□ 0.29
CCL20P78556 AC022413.1-201ENST00000624602 984 ntBASIC16.88■□□□□ 0.29
CCL20P78556 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL20P78556 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL20P78556 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL20P78556 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCL20P78556 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL20P78556 GABARAPL3-202ENST00000624044 1851 ntBASIC16.88■□□□□ 0.29
CCL20P78556 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL20P78556 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL20P78556 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL20P78556 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL20P78556 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL20P78556 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL20P78556 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL20P78556 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL20P78556 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCL20P78556 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL20P78556 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL20P78556 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL20P78556 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL20P78556 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCL20P78556 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL20P78556 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.87■□□□□ 0.29
CCL20P78556 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL20P78556 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
CCL20P78556 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCL20P78556 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.87■□□□□ 0.29
CCL20P78556 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC16.87■□□□□ 0.29
CCL20P78556 AC026471.6-201ENST00000622954 1905 ntBASIC16.87■□□□□ 0.29
CCL20P78556 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL20P78556 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL20P78556 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.87■□□□□ 0.29
CCL20P78556 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL20P78556 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL20P78556 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL20P78556 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCL20P78556 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL20P78556 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL20P78556 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL20P78556 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms