Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRPXP78539 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SRPXP78539 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRPXP78539 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRPXP78539 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRPXP78539 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRPXP78539 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.66■□□□□ 0.42
SRPXP78539 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRPXP78539 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRPXP78539 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRPXP78539 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRPXP78539 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRPXP78539 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRPXP78539 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRPXP78539 AL121603.2-201ENST00000557373 2117 ntBASIC17.66■□□□□ 0.42
SRPXP78539 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRPXP78539 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.66■□□□□ 0.42
SRPXP78539 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRPXP78539 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SRPXP78539 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRPXP78539 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRPXP78539 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.65■□□□□ 0.42
SRPXP78539 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SRPXP78539 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRPXP78539 PVT1_1.1-201ENST00000615125 194 ntBASIC17.65■□□□□ 0.42
SRPXP78539 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.65■□□□□ 0.42
SRPXP78539 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRPXP78539 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRPXP78539 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRPXP78539 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.65■□□□□ 0.42
SRPXP78539 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.65■□□□□ 0.42
SRPXP78539 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SRPXP78539 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SRPXP78539 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.65■□□□□ 0.42
SRPXP78539 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.64■□□□□ 0.42
SRPXP78539 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.64■□□□□ 0.42
SRPXP78539 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.64■□□□□ 0.41
SRPXP78539 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRPXP78539 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRPXP78539 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRPXP78539 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.64■□□□□ 0.41
SRPXP78539 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.64■□□□□ 0.41
SRPXP78539 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRPXP78539 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRPXP78539 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRPXP78539 AF106564.1-201ENST00000607058 2553 ntBASIC17.64■□□□□ 0.41
SRPXP78539 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRPXP78539 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRPXP78539 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRPXP78539 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
SRPXP78539 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRPXP78539 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.63■□□□□ 0.41
SRPXP78539 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRPXP78539 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRPXP78539 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRPXP78539 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.63■□□□□ 0.41
SRPXP78539 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRPXP78539 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SRPXP78539 MIR4508-201ENST00000584178 70 ntBASIC17.63■□□□□ 0.41
SRPXP78539 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRPXP78539 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SRPXP78539 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRPXP78539 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.63■□□□□ 0.41
SRPXP78539 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.63■□□□□ 0.41
SRPXP78539 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.63■□□□□ 0.41
SRPXP78539 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRPXP78539 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRPXP78539 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SRPXP78539 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRPXP78539 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SRPXP78539 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRPXP78539 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SRPXP78539 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRPXP78539 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRPXP78539 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRPXP78539 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRPXP78539 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRPXP78539 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRPXP78539 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.62■□□□□ 0.41
SRPXP78539 AC137630.3-201ENST00000607245 391 ntBASIC17.62■□□□□ 0.41
SRPXP78539 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRPXP78539 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.62■□□□□ 0.41
SRPXP78539 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRPXP78539 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRPXP78539 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRPXP78539 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SRPXP78539 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.62■□□□□ 0.41
SRPXP78539 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRPXP78539 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.62■□□□□ 0.41
SRPXP78539 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRPXP78539 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRPXP78539 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRPXP78539 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRPXP78539 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRPXP78539 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SRPXP78539 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRPXP78539 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRPXP78539 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.61■□□□□ 0.41
SRPXP78539 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
SRPXP78539 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms