Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.74■■□□□ 1.07
WNT3AP56704 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.74■■□□□ 1.07
WNT3AP56704 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
WNT3AP56704 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
WNT3AP56704 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
WNT3AP56704 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
WNT3AP56704 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.74■■□□□ 1.07
WNT3AP56704 FBXW4P1-201ENST00000426721 2239 ntBASIC21.74■■□□□ 1.07
WNT3AP56704 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
WNT3AP56704 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
WNT3AP56704 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.73■■□□□ 1.07
WNT3AP56704 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.73■■□□□ 1.07
WNT3AP56704 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.73■■□□□ 1.07
WNT3AP56704 AL034346.1-201ENST00000568244 1277 ntBASIC21.73■■□□□ 1.07
WNT3AP56704 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
WNT3AP56704 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
WNT3AP56704 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
WNT3AP56704 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
WNT3AP56704 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
WNT3AP56704 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.72■■□□□ 1.07
WNT3AP56704 AC010542.4-201ENST00000563151 1910 ntBASIC21.72■■□□□ 1.07
WNT3AP56704 AC026471.6-201ENST00000622954 1905 ntBASIC21.72■■□□□ 1.07
WNT3AP56704 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
WNT3AP56704 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
WNT3AP56704 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.72■■□□□ 1.07
WNT3AP56704 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
WNT3AP56704 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
WNT3AP56704 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
WNT3AP56704 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
WNT3AP56704 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.72■■□□□ 1.07
WNT3AP56704 MIR572-201ENST00000384983 95 ntBASIC21.72■■□□□ 1.07
WNT3AP56704 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
WNT3AP56704 AC105233.4-201ENST00000642045 216 ntBASIC21.72■■□□□ 1.07
WNT3AP56704 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
WNT3AP56704 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
WNT3AP56704 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.72■■□□□ 1.07
WNT3AP56704 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
WNT3AP56704 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.72■■□□□ 1.07
WNT3AP56704 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.71■■□□□ 1.07
WNT3AP56704 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
WNT3AP56704 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.71■■□□□ 1.07
WNT3AP56704 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
WNT3AP56704 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
WNT3AP56704 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
WNT3AP56704 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
WNT3AP56704 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.71■■□□□ 1.07
WNT3AP56704 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
WNT3AP56704 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
WNT3AP56704 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
WNT3AP56704 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
WNT3AP56704 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
WNT3AP56704 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.71■■□□□ 1.07
WNT3AP56704 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
WNT3AP56704 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.7■■□□□ 1.06
WNT3AP56704 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
WNT3AP56704 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.7■■□□□ 1.06
WNT3AP56704 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.7■■□□□ 1.06
WNT3AP56704 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.7■■□□□ 1.06
WNT3AP56704 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.7■■□□□ 1.06
WNT3AP56704 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.7■■□□□ 1.06
WNT3AP56704 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
WNT3AP56704 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
WNT3AP56704 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
WNT3AP56704 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
WNT3AP56704 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
WNT3AP56704 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.7■■□□□ 1.06
WNT3AP56704 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
WNT3AP56704 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
WNT3AP56704 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
WNT3AP56704 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
WNT3AP56704 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
WNT3AP56704 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
WNT3AP56704 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.69■■□□□ 1.06
WNT3AP56704 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.69■■□□□ 1.06
WNT3AP56704 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
WNT3AP56704 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.69■■□□□ 1.06
WNT3AP56704 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.69■■□□□ 1.06
WNT3AP56704 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.69■■□□□ 1.06
WNT3AP56704 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.69■■□□□ 1.06
WNT3AP56704 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
WNT3AP56704 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
WNT3AP56704 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
WNT3AP56704 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
WNT3AP56704 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
WNT3AP56704 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
WNT3AP56704 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
WNT3AP56704 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
WNT3AP56704 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
WNT3AP56704 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
WNT3AP56704 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
WNT3AP56704 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
WNT3AP56704 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
WNT3AP56704 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.67■■□□□ 1.06
WNT3AP56704 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.67■■□□□ 1.06
WNT3AP56704 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
WNT3AP56704 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
WNT3AP56704 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
WNT3AP56704 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
WNT3AP56704 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.67■■□□□ 1.06
WNT3AP56704 AC105265.2-201ENST00000467189 838 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms