Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC009102.2-201ENST00000606772 1639 ntBASIC19.58■□□□□ 0.73
CDH11P55287 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDH11P55287 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.58■□□□□ 0.73
CDH11P55287 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.58■□□□□ 0.73
CDH11P55287 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH11P55287 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.58■□□□□ 0.72
CDH11P55287 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH11P55287 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDH11P55287 AC244015.2-201ENST00000616358 1861 ntBASIC19.58■□□□□ 0.72
CDH11P55287 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.58■□□□□ 0.72
CDH11P55287 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDH11P55287 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH11P55287 AC005229.4-201ENST00000610085 2198 ntBASIC19.57■□□□□ 0.72
CDH11P55287 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH11P55287 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH11P55287 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH11P55287 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.57■□□□□ 0.72
CDH11P55287 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH11P55287 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH11P55287 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
CDH11P55287 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.57■□□□□ 0.72
CDH11P55287 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH11P55287 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CDH11P55287 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH11P55287 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH11P55287 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH11P55287 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH11P55287 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CDH11P55287 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CDH11P55287 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH11P55287 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH11P55287 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH11P55287 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.56■□□□□ 0.72
CDH11P55287 AC004687.1-201ENST00000579003 1625 ntBASIC19.56■□□□□ 0.72
CDH11P55287 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH11P55287 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH11P55287 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH11P55287 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH11P55287 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.56■□□□□ 0.72
CDH11P55287 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.56■□□□□ 0.72
CDH11P55287 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH11P55287 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.56■□□□□ 0.72
CDH11P55287 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH11P55287 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH11P55287 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH11P55287 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH11P55287 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CDH11P55287 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.55■□□□□ 0.72
CDH11P55287 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH11P55287 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH11P55287 EDA-201ENST00000338901 1233 ntBASIC19.55■□□□□ 0.72
CDH11P55287 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH11P55287 AC099791.2-201ENST00000605725 427 ntBASIC19.55■□□□□ 0.72
CDH11P55287 CA15P2-201ENST00000611168 834 ntBASIC19.55■□□□□ 0.72
CDH11P55287 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH11P55287 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH11P55287 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH11P55287 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH11P55287 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH11P55287 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CDH11P55287 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.55■□□□□ 0.72
CDH11P55287 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH11P55287 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH11P55287 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH11P55287 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH11P55287 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH11P55287 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH11P55287 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH11P55287 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH11P55287 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH11P55287 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH11P55287 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.53■□□□□ 0.72
CDH11P55287 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.53■□□□□ 0.72
CDH11P55287 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.53■□□□□ 0.72
CDH11P55287 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.53■□□□□ 0.72
CDH11P55287 AL355001.2-201ENST00000620617 1191 ntBASIC19.53■□□□□ 0.72
CDH11P55287 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH11P55287 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH11P55287 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH11P55287 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH11P55287 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH11P55287 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CDH11P55287 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH11P55287 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CDH11P55287 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH11P55287 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH11P55287 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH11P55287 C17orf82-201ENST00000623772 1530 ntBASIC19.52■□□□□ 0.72
CDH11P55287 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.52■□□□□ 0.72
CDH11P55287 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH11P55287 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.52■□□□□ 0.72
CDH11P55287 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH11P55287 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH11P55287 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.52■□□□□ 0.72
CDH11P55287 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.52■□□□□ 0.72
CDH11P55287 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.52■□□□□ 0.72
CDH11P55287 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH11P55287 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.52■□□□□ 0.72
CDH11P55287 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH11P55287 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms