Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA4P54764 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA4P54764 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA4P54764 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA4P54764 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA4P54764 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA4P54764 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA4P54764 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.72■□□□□ 0.91
EPHA4P54764 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
EPHA4P54764 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.72■□□□□ 0.91
EPHA4P54764 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA4P54764 AC073111.5-205ENST00000641717 521 ntBASIC20.72■□□□□ 0.91
EPHA4P54764 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA4P54764 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
EPHA4P54764 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
EPHA4P54764 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA4P54764 AC137767.1-201ENST00000602918 1920 ntBASIC20.72■□□□□ 0.91
EPHA4P54764 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA4P54764 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA4P54764 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA4P54764 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHA4P54764 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHA4P54764 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
EPHA4P54764 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHA4P54764 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
EPHA4P54764 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHA4P54764 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
EPHA4P54764 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.71■□□□□ 0.91
EPHA4P54764 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
EPHA4P54764 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.71■□□□□ 0.91
EPHA4P54764 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.71■□□□□ 0.91
EPHA4P54764 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHA4P54764 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHA4P54764 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
EPHA4P54764 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHA4P54764 AC068473.5-201ENST00000616428 2072 ntBASIC20.71■□□□□ 0.91
EPHA4P54764 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
EPHA4P54764 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
EPHA4P54764 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EPHA4P54764 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EPHA4P54764 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
EPHA4P54764 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EPHA4P54764 CDCA4P2-201ENST00000441182 718 ntBASIC20.7■□□□□ 0.9
EPHA4P54764 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EPHA4P54764 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.7■□□□□ 0.9
EPHA4P54764 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.7■□□□□ 0.9
EPHA4P54764 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EPHA4P54764 RAP2CP1-201ENST00000605103 478 ntBASIC20.7■□□□□ 0.9
EPHA4P54764 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
EPHA4P54764 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EPHA4P54764 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
EPHA4P54764 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.7■□□□□ 0.9
EPHA4P54764 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EPHA4P54764 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
EPHA4P54764 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHA4P54764 AP006587.3-201ENST00000525742 1516 ntBASIC20.69■□□□□ 0.9
EPHA4P54764 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHA4P54764 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHA4P54764 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.69■□□□□ 0.9
EPHA4P54764 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.69■□□□□ 0.9
EPHA4P54764 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHA4P54764 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHA4P54764 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.69■□□□□ 0.9
EPHA4P54764 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHA4P54764 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EPHA4P54764 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EPHA4P54764 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHA4P54764 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHA4P54764 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
EPHA4P54764 ID1-201ENST00000376105 1233 ntBASIC20.68■□□□□ 0.9
EPHA4P54764 AC026185.1-201ENST00000445748 174 ntBASIC20.68■□□□□ 0.9
EPHA4P54764 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHA4P54764 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.68■□□□□ 0.9
EPHA4P54764 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.68■□□□□ 0.9
EPHA4P54764 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHA4P54764 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.68■□□□□ 0.9
EPHA4P54764 AC011767.1-201ENST00000617410 1153 ntBASIC20.68■□□□□ 0.9
EPHA4P54764 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EPHA4P54764 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.68■□□□□ 0.9
EPHA4P54764 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHA4P54764 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHA4P54764 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHA4P54764 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHA4P54764 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHA4P54764 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EPHA4P54764 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.67■□□□□ 0.9
EPHA4P54764 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.67■□□□□ 0.9
EPHA4P54764 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.67■□□□□ 0.9
EPHA4P54764 AC138907.5-202ENST00000569484 235 ntBASIC20.67■□□□□ 0.9
EPHA4P54764 AP001160.3-201ENST00000601484 763 ntBASIC20.67■□□□□ 0.9
EPHA4P54764 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.67■□□□□ 0.9
EPHA4P54764 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHA4P54764 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
EPHA4P54764 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHA4P54764 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EPHA4P54764 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHA4P54764 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
EPHA4P54764 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHA4P54764 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHA4P54764 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms