Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 HTA1YDR225W 399 nt4.24□□□□□ -1.73
SUB1P54000 ECM11YDR446W 909 nt4.24□□□□□ -1.73
SUB1P54000 SDP1YIL113W 630 nt4.24□□□□□ -1.73
SUB1P54000 YJR037WYJR037W 384 nt4.24□□□□□ -1.73
SUB1P54000 SEC15YGL233W 2733 nt4.23□□□□□ -1.73
SUB1P54000 SST2YLR452C 2097 nt4.23□□□□□ -1.73
SUB1P54000 XRS2YDR369C 2565 nt4.23□□□□□ -1.73
SUB1P54000 NCR1YPL006W 3513 nt4.23□□□□□ -1.73
SUB1P54000 REG1YDR028C 3045 nt4.23□□□□□ -1.73
SUB1P54000 NOP58YOR310C 1536 nt4.23□□□□□ -1.73
SUB1P54000 YEL074WYEL074W 339 nt4.23□□□□□ -1.73
SUB1P54000 YGL138CYGL138C 1038 nt4.23□□□□□ -1.73
SUB1P54000 AIR1YIL079C 1083 nt4.23□□□□□ -1.73
SUB1P54000 AIM25YJR100C 984 nt4.23□□□□□ -1.73
SUB1P54000 CTL1YMR180C 963 nt4.23□□□□□ -1.73
SUB1P54000 YOL118CYOL118C 309 nt4.23□□□□□ -1.73
SUB1P54000 PRM4YPL156C 855 nt4.23□□□□□ -1.73
SUB1P54000 POL30YBR088C 777 nt4.23□□□□□ -1.73
SUB1P54000 SWI1YPL016W 3945 nt4.23□□□□□ -1.73
SUB1P54000 RTC1YOL138C 4026 nt4.22□□□□□ -1.73
SUB1P54000 RAD55YDR076W 1221 nt4.22□□□□□ -1.73
SUB1P54000 SCM4YGR049W 564 nt4.22□□□□□ -1.73
SUB1P54000 GAB1YLR459W 1185 nt4.22□□□□□ -1.73
SUB1P54000 PCL1YNL289W 840 nt4.22□□□□□ -1.73
SUB1P54000 RSM19YNR037C 276 nt4.22□□□□□ -1.73
SUB1P54000 YBR053CYBR053C 1077 nt4.22□□□□□ -1.73
SUB1P54000 YPR071WYPR071W 636 nt4.22□□□□□ -1.73
SUB1P54000 RER1YCL001W 567 nt4.22□□□□□ -1.73
SUB1P54000 SSU1YPL092W 1377 nt4.22□□□□□ -1.73
SUB1P54000 ENA5YDR038C 3276 nt4.22□□□□□ -1.73
SUB1P54000 ENA2YDR039C 3276 nt4.22□□□□□ -1.73
SUB1P54000 ENA1YDR040C 3276 nt4.22□□□□□ -1.73
SUB1P54000 YGR114CYGR114C 390 nt4.21□□□□□ -1.74
SUB1P54000 YGR161W-CYGR161W-C 279 nt4.21□□□□□ -1.74
SUB1P54000 PAU13YHL046C 363 nt4.21□□□□□ -1.74
SUB1P54000 SAS5YOR213C 747 nt4.21□□□□□ -1.74
SUB1P54000 ICS2YBR157C 768 nt4.21□□□□□ -1.74
SUB1P54000 GDT1YBR187W 843 nt4.21□□□□□ -1.74
SUB1P54000 CDC40YDR364C 1368 nt4.21□□□□□ -1.74
SUB1P54000 EXO70YJL085W 1872 nt4.21□□□□□ -1.74
SUB1P54000 LCB4YOR171C 1875 nt4.21□□□□□ -1.74
SUB1P54000 YNR066CYNR066C 1311 nt4.21□□□□□ -1.74
SUB1P54000 IOC3YFR013W 2364 nt4.2□□□□□ -1.74
SUB1P54000 SPH1YLR313C 1593 nt4.2□□□□□ -1.74
SUB1P54000 YJR030CYJR030C 2238 nt4.2□□□□□ -1.74
SUB1P54000 THO1YER063W 657 nt4.2□□□□□ -1.74
SUB1P54000 OTU1YFL044C 906 nt4.2□□□□□ -1.74
SUB1P54000 APC1YNL172W 5247 nt4.2□□□□□ -1.74
SUB1P54000 RRP14YKL082C 1305 nt4.2□□□□□ -1.74
SUB1P54000 MTL1YGR023W 1656 nt4.19□□□□□ -1.74
SUB1P54000 FLO8YER109C 2400 nt4.19□□□□□ -1.74
SUB1P54000 YIR040CYIR040C 333 nt4.19□□□□□ -1.74
SUB1P54000 YKL156C-AYKL156C-A 117 nt4.19□□□□□ -1.74
SUB1P54000 YNL184CYNL184C 327 nt4.19□□□□□ -1.74
SUB1P54000 MCT1YOR221C 1083 nt4.19□□□□□ -1.74
SUB1P54000 PLP2YOR281C 861 nt4.19□□□□□ -1.74
SUB1P54000 KIN3YAR018C 1308 nt4.19□□□□□ -1.74
SUB1P54000 RPO31YOR116C 4383 nt4.18□□□□□ -1.74
SUB1P54000 KRI1YNL308C 1776 nt4.18□□□□□ -1.74
SUB1P54000 YDR320W-BYDR320W-B 138 nt4.18□□□□□ -1.74
SUB1P54000 YEL075CYEL075C 369 nt4.18□□□□□ -1.74
SUB1P54000 VFA1YER128W 612 nt4.18□□□□□ -1.74
SUB1P54000 YGR051CYGR051C 324 nt4.18□□□□□ -1.74
SUB1P54000 MMF1YIL051C 438 nt4.18□□□□□ -1.74
SUB1P54000 ECM23YPL021W 564 nt4.18□□□□□ -1.74
SUB1P54000 RPB2YOR151C 3675 nt4.18□□□□□ -1.74
SUB1P54000 HFM1YGL251C 3564 nt4.18□□□□□ -1.74
SUB1P54000 BIK1YCL029C 1323 nt4.18□□□□□ -1.74
SUB1P54000 YDL176WYDL176W 2127 nt4.18□□□□□ -1.74
SUB1P54000 PRM1YNL279W 1986 nt4.17□□□□□ -1.74
SUB1P54000 ELO2YCR034W 1044 nt4.17□□□□□ -1.74
SUB1P54000 SEM1YDR363W-A 270 nt4.17□□□□□ -1.74
SUB1P54000 YGR039WYGR039W 312 nt4.17□□□□□ -1.74
SUB1P54000 BCD1YHR040W 1101 nt4.17□□□□□ -1.74
SUB1P54000 YKR011CYKR011C 1062 nt4.17□□□□□ -1.74
SUB1P54000 RIF2YLR453C 1188 nt4.17□□□□□ -1.74
SUB1P54000 ATG16YMR159C 453 nt4.17□□□□□ -1.74
SUB1P54000 UTP23YOR004W 765 nt4.17□□□□□ -1.74
SUB1P54000 YOR062CYOR062C 807 nt4.17□□□□□ -1.74
SUB1P54000 APD1YBR151W 951 nt4.17□□□□□ -1.74
SUB1P54000 ERV15YBR210W 429 nt4.17□□□□□ -1.74
SUB1P54000 VPS3YDR495C 3036 nt4.17□□□□□ -1.74
SUB1P54000 EMP70YLR083C 2004 nt4.17□□□□□ -1.74
SUB1P54000 MDV1YJL112W 2145 nt4.16□□□□□ -1.74
SUB1P54000 WHI3YNL197C 1986 nt4.16□□□□□ -1.74
SUB1P54000 GCR1YPL075W 2358 nt4.16□□□□□ -1.74
SUB1P54000 PFS1YHR185C 714 nt4.16□□□□□ -1.74
SUB1P54000 FMP46YKR049C 402 nt4.16□□□□□ -1.74
SUB1P54000 MLH2YLR035C 2088 nt4.16□□□□□ -1.74
SUB1P54000 MSH2YOL090W 2895 nt4.15□□□□□ -1.74
SUB1P54000 YHR112CYHR112C 1137 nt4.15□□□□□ -1.75
SUB1P54000 YAL034C-BYAL034C-B 354 nt4.15□□□□□ -1.75
SUB1P54000 VMA5YKL080W 1179 nt4.15□□□□□ -1.75
SUB1P54000 SKG1YKR100C 1068 nt4.15□□□□□ -1.75
SUB1P54000 SSN8YNL025C 972 nt4.15□□□□□ -1.75
SUB1P54000 TAF2YCR042C 4224 nt4.15□□□□□ -1.75
SUB1P54000 ARG5,6YER069W 2592 nt4.15□□□□□ -1.75
SUB1P54000 SUP45YBR143C 1314 nt4.15□□□□□ -1.75
SUB1P54000 PHM7YOL084W 2976 nt4.14□□□□□ -1.75
SUB1P54000 YDR246W-AYDR246W-A 201 nt4.14□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms