Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MFSD11-216ENST00000590393 1141 ntBASIC20.86■□□□□ 0.93
PDX1P52945 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDX1P52945 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
PDX1P52945 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDX1P52945 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PDX1P52945 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDX1P52945 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDX1P52945 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDX1P52945 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDX1P52945 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PDX1P52945 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDX1P52945 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDX1P52945 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDX1P52945 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PDX1P52945 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDX1P52945 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.85■□□□□ 0.93
PDX1P52945 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDX1P52945 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDX1P52945 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.85■□□□□ 0.93
PDX1P52945 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.85■□□□□ 0.93
PDX1P52945 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PDX1P52945 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDX1P52945 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.85■□□□□ 0.93
PDX1P52945 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDX1P52945 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDX1P52945 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDX1P52945 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PDX1P52945 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDX1P52945 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.84■□□□□ 0.93
PDX1P52945 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.84■□□□□ 0.93
PDX1P52945 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.84■□□□□ 0.93
PDX1P52945 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDX1P52945 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDX1P52945 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.83■□□□□ 0.93
PDX1P52945 AC005224.4-201ENST00000583262 1652 ntBASIC20.83■□□□□ 0.93
PDX1P52945 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDX1P52945 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDX1P52945 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.83■□□□□ 0.93
PDX1P52945 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDX1P52945 ABHD17AP1-201ENST00000358206 933 ntBASIC20.83■□□□□ 0.93
PDX1P52945 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.83■□□□□ 0.93
PDX1P52945 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDX1P52945 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.83■□□□□ 0.93
PDX1P52945 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.83■□□□□ 0.93
PDX1P52945 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PDX1P52945 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDX1P52945 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDX1P52945 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.83■□□□□ 0.92
PDX1P52945 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDX1P52945 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDX1P52945 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDX1P52945 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PDX1P52945 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.82■□□□□ 0.92
PDX1P52945 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDX1P52945 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDX1P52945 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
PDX1P52945 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.82■□□□□ 0.92
PDX1P52945 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.82■□□□□ 0.92
PDX1P52945 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDX1P52945 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDX1P52945 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.82■□□□□ 0.92
PDX1P52945 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PDX1P52945 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDX1P52945 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.82■□□□□ 0.92
PDX1P52945 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.82■□□□□ 0.92
PDX1P52945 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PDX1P52945 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDX1P52945 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDX1P52945 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.81■□□□□ 0.92
PDX1P52945 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDX1P52945 AC104187.1-201ENST00000607510 612 ntBASIC20.81■□□□□ 0.92
PDX1P52945 AL050303.2-201ENST00000619798 666 ntBASIC20.81■□□□□ 0.92
PDX1P52945 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.81■□□□□ 0.92
PDX1P52945 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDX1P52945 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDX1P52945 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PDX1P52945 KRT87P-202ENST00000534226 1464 ntBASIC20.81■□□□□ 0.92
PDX1P52945 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDX1P52945 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDX1P52945 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.81■□□□□ 0.92
PDX1P52945 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDX1P52945 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.8■□□□□ 0.92
PDX1P52945 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDX1P52945 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.8■□□□□ 0.92
PDX1P52945 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDX1P52945 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDX1P52945 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDX1P52945 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.8■□□□□ 0.92
PDX1P52945 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PDX1P52945 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.8■□□□□ 0.92
PDX1P52945 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.8■□□□□ 0.92
PDX1P52945 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDX1P52945 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
PDX1P52945 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PDX1P52945 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
PDX1P52945 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDX1P52945 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDX1P52945 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDX1P52945 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
PDX1P52945 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms