Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 YLR230WYLR230W 306 nt2.25□□□□□ -2.05
VPS55P47111 GCD7YLR291C 1146 nt2.25□□□□□ -2.05
VPS55P47111 OST6YML019W 999 nt2.25□□□□□ -2.05
VPS55P47111 ATG3YNR007C 933 nt2.25□□□□□ -2.05
VPS55P47111 TGL1YKL140W 1647 nt2.24□□□□□ -2.05
VPS55P47111 NAT1YDL040C 2565 nt2.24□□□□□ -2.05
VPS55P47111 SAP1YER047C 2694 nt2.24□□□□□ -2.05
VPS55P47111 RDI1YDL135C 609 nt2.24□□□□□ -2.05
VPS55P47111 YGL193CYGL193C 312 nt2.24□□□□□ -2.05
VPS55P47111 USB1YLR132C 873 nt2.24□□□□□ -2.05
VPS55P47111 RPL33AYPL143W 324 nt2.24□□□□□ -2.05
VPS55P47111 DIM1YPL266W 957 nt2.24□□□□□ -2.05
VPS55P47111 YPR077CYPR077C 372 nt2.24□□□□□ -2.05
VPS55P47111 FRE2YKL220C 2136 nt2.24□□□□□ -2.05
VPS55P47111 CDC20YGL116W 1833 nt2.24□□□□□ -2.05
VPS55P47111 TFC1YBR123C 1950 nt2.23□□□□□ -2.05
VPS55P47111 ORC1YML065W 2745 nt2.23□□□□□ -2.05
VPS55P47111 CYR1YJL005W 6081 nt2.23□□□□□ -2.05
VPS55P47111 YDR149CYDR149C 708 nt2.23□□□□□ -2.05
VPS55P47111 ERP6YGL002W 651 nt2.23□□□□□ -2.05
VPS55P47111 PNC1YGL037C 651 nt2.23□□□□□ -2.05
VPS55P47111 CFD1YIL003W 882 nt2.23□□□□□ -2.05
VPS55P47111 RPS21BYJL136C 264 nt2.23□□□□□ -2.05
VPS55P47111 YLR154C-HYLR154C-H 132 nt2.23□□□□□ -2.05
VPS55P47111 YLR156C-AYLR156C-A 132 nt2.23□□□□□ -2.05
VPS55P47111 YLR157C-CYLR157C-C 132 nt2.23□□□□□ -2.05
VPS55P47111 YLR159C-AYLR159C-A 132 nt2.23□□□□□ -2.05
VPS55P47111 SAM37YMR060C 984 nt2.23□□□□□ -2.05
VPS55P47111 YMR141CYMR141C 309 nt2.23□□□□□ -2.05
VPS55P47111 RRG9YNL213C 645 nt2.23□□□□□ -2.05
VPS55P47111 XRN1YGL173C 4587 nt2.23□□□□□ -2.05
VPS55P47111 IOC4YMR044W 1428 nt2.23□□□□□ -2.05
VPS55P47111 ERG11YHR007C 1593 nt2.23□□□□□ -2.05
VPS55P47111 TPD3YAL016W 1908 nt2.23□□□□□ -2.05
VPS55P47111 RSN1YMR266W 2862 nt2.22□□□□□ -2.05
VPS55P47111 CEP3YMR168C 1827 nt2.22□□□□□ -2.05
VPS55P47111 TEC1YBR083W 1461 nt2.22□□□□□ -2.05
VPS55P47111 YHR145CYHR145C 357 nt2.22□□□□□ -2.05
VPS55P47111 DDI3YNL335W 678 nt2.22□□□□□ -2.05
VPS55P47111 CPR8YNR028W 927 nt2.22□□□□□ -2.05
VPS55P47111 YPL107WYPL107W 747 nt2.22□□□□□ -2.05
VPS55P47111 MEF1YLR069C 2286 nt2.21□□□□□ -2.06
VPS55P47111 CLD1YGR110W 1338 nt2.21□□□□□ -2.06
VPS55P47111 YEL032C-AYEL032C-A 162 nt2.21□□□□□ -2.06
VPS55P47111 PEF1YGR058W 1008 nt2.21□□□□□ -2.06
VPS55P47111 LSM1YJL124C 519 nt2.21□□□□□ -2.06
VPS55P47111 YNR071CYNR071C 1029 nt2.21□□□□□ -2.06
VPS55P47111 DDP1YOR163W 567 nt2.21□□□□□ -2.06
VPS55P47111 YOR331CYOR331C 558 nt2.21□□□□□ -2.06
VPS55P47111 RSE1YML049C 4086 nt2.21□□□□□ -2.06
VPS55P47111 RAX2YLR084C 3663 nt2.2□□□□□ -2.06
VPS55P47111 GYP7YDL234C 2241 nt2.2□□□□□ -2.06
VPS55P47111 TRA1YHR099W 11235 nt2.2□□□□□ -2.06
VPS55P47111 YDL183CYDL183C 963 nt2.2□□□□□ -2.06
VPS55P47111 TLG1YDR468C 675 nt2.2□□□□□ -2.06
VPS55P47111 YDR491CYDR491C 492 nt2.2□□□□□ -2.06
VPS55P47111 RPL27AYHR010W 411 nt2.2□□□□□ -2.06
VPS55P47111 GPI14YJR013W 1212 nt2.2□□□□□ -2.06
VPS55P47111 YKR033CYKR033C 426 nt2.2□□□□□ -2.06
VPS55P47111 MCA1YOR197W 1299 nt2.2□□□□□ -2.06
VPS55P47111 YOR238WYOR238W 912 nt2.2□□□□□ -2.06
VPS55P47111 YPR136CYPR136C 513 nt2.2□□□□□ -2.06
VPS55P47111 YBR116CYBR116C 528 nt2.2□□□□□ -2.06
VPS55P47111 DAP2YHR028C 2457 nt2.2□□□□□ -2.06
VPS55P47111 PBS2YJL128C 2007 nt2.2□□□□□ -2.06
VPS55P47111 SKN7YHR206W 1869 nt2.2□□□□□ -2.06
VPS55P47111 SLM2YNL047C 1971 nt2.19□□□□□ -2.06
VPS55P47111 BEM4YPL161C 1902 nt2.19□□□□□ -2.06
VPS55P47111 SET4YJL105W 1683 nt2.19□□□□□ -2.06
VPS55P47111 SER3YER081W 1410 nt2.19□□□□□ -2.06
VPS55P47111 HDA2YDR295C 2025 nt2.19□□□□□ -2.06
VPS55P47111 YGL218WYGL218W 651 nt2.19□□□□□ -2.06
VPS55P47111 ATG27YJL178C 816 nt2.19□□□□□ -2.06
VPS55P47111 TPP1YMR156C 717 nt2.19□□□□□ -2.06
VPS55P47111 RUF21RUF21 707 nt2.19□□□□□ -2.06
VPS55P47111 IZH2YOL002C 954 nt2.19□□□□□ -2.06
VPS55P47111 MSN1YOL116W 1149 nt2.19□□□□□ -2.06
VPS55P47111 YPL014WYPL014W 1146 nt2.19□□□□□ -2.06
VPS55P47111 PPT2YPL148C 522 nt2.19□□□□□ -2.06
VPS55P47111 YBR255C-AYBR255C-A 363 nt2.19□□□□□ -2.06
VPS55P47111 RAD5YLR032W 3510 nt2.19□□□□□ -2.06
VPS55P47111 VAC8YEL013W 1737 nt2.19□□□□□ -2.06
VPS55P47111 FRE8YLR047C 2061 nt2.19□□□□□ -2.06
VPS55P47111 MET5YJR137C 4329 nt2.19□□□□□ -2.06
VPS55P47111 SMP3YOR149C 1551 nt2.19□□□□□ -2.06
VPS55P47111 YPL216WYPL216W 3309 nt2.19□□□□□ -2.06
VPS55P47111 CAF130YGR134W 3369 nt2.18□□□□□ -2.06
VPS55P47111 PHO12YHR215W 1404 nt2.18□□□□□ -2.06
VPS55P47111 PHO11YAR071W 1404 nt2.18□□□□□ -2.06
VPS55P47111 VMA8YEL051W 771 nt2.18□□□□□ -2.06
VPS55P47111 HAT2YEL056W 1206 nt2.18□□□□□ -2.06
VPS55P47111 YGR121W-AYGR121W-A 216 nt2.18□□□□□ -2.06
VPS55P47111 UIP3YAR027W 708 nt2.18□□□□□ -2.06
VPS55P47111 YLR297WYLR297W 390 nt2.18□□□□□ -2.06
VPS55P47111 YML037CYML037C 1023 nt2.18□□□□□ -2.06
VPS55P47111 RIB5YBR256C 717 nt2.18□□□□□ -2.06
VPS55P47111 TMA108YIL137C 2841 nt2.18□□□□□ -2.06
VPS55P47111 TCB2YNL087W 3537 nt2.18□□□□□ -2.06
VPS55P47111 CTR86YCR054C 1692 nt2.18□□□□□ -2.06
VPS55P47111 NUM1YDR150W 8247 nt2.18□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms