Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	GIC1	YHR061C	945 nt		4.38	□□□□□ -1.71
CAF16	P43569	EPT1	YHR123W	1176 nt		4.38	□□□□□ -1.71
CAF16	P43569	PAN6	YIL145C	930 nt		4.38	□□□□□ -1.71
CAF16	P43569	OAR1	YKL055C	837 nt		4.38	□□□□□ -1.71
CAF16	P43569	YMR087W	YMR087W	855 nt		4.38	□□□□□ -1.71
CAF16	P43569	RLP7	YNL002C	969 nt		4.38	□□□□□ -1.71
CAF16	P43569	IST1	YNL265C	897 nt		4.38	□□□□□ -1.71
CAF16	P43569	YOR082C	YOR082C	342 nt		4.38	□□□□□ -1.71
CAF16	P43569	MEI5	YPL121C	669 nt		4.38	□□□□□ -1.71
CAF16	P43569	UBX7	YBR273C	1311 nt		4.38	□□□□□ -1.71
CAF16	P43569	YHR045W	YHR045W	1683 nt		4.38	□□□□□ -1.71
CAF16	P43569	UBX3	YDL091C	1368 nt		4.38	□□□□□ -1.71
CAF16	P43569	YDR179W-A	YDR179W-A	1392 nt		4.38	□□□□□ -1.71
CAF16	P43569	GYP6	YJL044C	1377 nt		4.38	□□□□□ -1.71
CAF16	P43569	AEP2	YMR282C	1743 nt		4.38	□□□□□ -1.71
CAF16	P43569	VBA2	YBR293W	1425 nt		4.38	□□□□□ -1.71
CAF16	P43569	UBP12	YJL197W	3765 nt		4.37	□□□□□ -1.71
CAF16	P43569	YCR047W-A	YCR047W-A	207 nt		4.37	□□□□□ -1.71
CAF16	P43569	YDR461C-A	YDR461C-A	243 nt		4.37	□□□□□ -1.71
CAF16	P43569	TMA20	YER007C-A	546 nt		4.37	□□□□□ -1.71
CAF16	P43569	VMA21	YGR105W	234 nt		4.37	□□□□□ -1.71
CAF16	P43569	YKL065W-A	YKL065W-A	222 nt		4.37	□□□□□ -1.71
CAF16	P43569	YKL115C	YKL115C	393 nt		4.37	□□□□□ -1.71
CAF16	P43569	ERP1	YAR002C-A	660 nt		4.37	□□□□□ -1.71
CAF16	P43569	ECI1	YLR284C	843 nt		4.37	□□□□□ -1.71
CAF16	P43569	ISW2	YOR304W	3363 nt		4.37	□□□□□ -1.71
CAF16	P43569	EPO1	YMR124W	2832 nt		4.36	□□□□□ -1.71
CAF16	P43569	PAH1	YMR165C	2589 nt		4.36	□□□□□ -1.71
CAF16	P43569	YPD1	YDL235C	504 nt		4.36	□□□□□ -1.71
CAF16	P43569	TFB3	YDR460W	966 nt		4.36	□□□□□ -1.71
CAF16	P43569	SEC4	YFL005W	648 nt		4.36	□□□□□ -1.71
CAF16	P43569	ERJ5	YFR041C	888 nt		4.36	□□□□□ -1.71
CAF16	P43569	YPL035C	YPL035C	348 nt		4.36	□□□□□ -1.71
CAF16	P43569	YJL049W	YJL049W	1353 nt		4.36	□□□□□ -1.71
CAF16	P43569	ALO1	YML086C	1581 nt		4.36	□□□□□ -1.71
CAF16	P43569	SKG3	YLR187W	3081 nt		4.35	□□□□□ -1.71
CAF16	P43569	LHP1	YDL051W	828 nt		4.35	□□□□□ -1.71
CAF16	P43569	snR84	snR84	550 nt		4.35	□□□□□ -1.71
CAF16	P43569	YDR381C-A	YDR381C-A	345 nt		4.35	□□□□□ -1.71
CAF16	P43569	YDR417C	YDR417C	372 nt		4.35	□□□□□ -1.71
CAF16	P43569	LYS5	YGL154C	819 nt		4.35	□□□□□ -1.71
CAF16	P43569	YHR097C	YHR097C	1101 nt		4.35	□□□□□ -1.71
CAF16	P43569	IRC18	YJL037W	675 nt		4.35	□□□□□ -1.71
CAF16	P43569	NNF1	YJR112W	606 nt		4.35	□□□□□ -1.71
CAF16	P43569	YKL023C-A	YKL023C-A	228 nt		4.35	□□□□□ -1.71
CAF16	P43569	ATP14	YLR295C	375 nt		4.35	□□□□□ -1.71
CAF16	P43569	RRT1	YBL048W	312 nt		4.35	□□□□□ -1.71
CAF16	P43569	SIL1	YOL031C	1266 nt		4.35	□□□□□ -1.71
CAF16	P43569	NIP7	YPL211W	546 nt		4.35	□□□□□ -1.71
CAF16	P43569	ADF1	YCL058W-A	342 nt		4.35	□□□□□ -1.71
CAF16	P43569	YDR261C-D	YDR261C-D	4815 nt		4.35	□□□□□ -1.71
CAF16	P43569	MDM34	YGL219C	1380 nt		4.35	□□□□□ -1.71
CAF16	P43569	GRC3	YLL035W	1899 nt		4.35	□□□□□ -1.71
CAF16	P43569	YOR022C	YOR022C	2148 nt		4.34	□□□□□ -1.71
CAF16	P43569	YEL067C	YEL067C	588 nt		4.34	□□□□□ -1.71
CAF16	P43569	AML1	YGR001C	747 nt		4.34	□□□□□ -1.71
CAF16	P43569	SCW4	YGR279C	1161 nt		4.34	□□□□□ -1.71
CAF16	P43569	IME1	YJR094C	1083 nt		4.34	□□□□□ -1.71
CAF16	P43569	ATG10	YLL042C	504 nt		4.34	□□□□□ -1.71
CAF16	P43569	GIM5	YML094W	492 nt		4.34	□□□□□ -1.71
CAF16	P43569	ATP19	YOL077W-A	207 nt		4.34	□□□□□ -1.71
CAF16	P43569	snR24	snR24	89 nt		4.34	□□□□□ -1.71
CAF16	P43569	YCL012C	YCL012C	405 nt		4.34	□□□□□ -1.71
CAF16	P43569	PKP2	YGL059W	1476 nt		4.34	□□□□□ -1.71
CAF16	P43569	UBP6	YFR010W	1500 nt		4.34	□□□□□ -1.71
CAF16	P43569	RIM21	YNL294C	1602 nt		4.34	□□□□□ -1.71
CAF16	P43569	YPL260W	YPL260W	1656 nt		4.34	□□□□□ -1.71
CAF16	P43569	ULP1	YPL020C	1866 nt		4.34	□□□□□ -1.71
CAF16	P43569	THR4	YCR053W	1545 nt		4.33	□□□□□ -1.72
CAF16	P43569	CIT1	YNR001C	1440 nt		4.33	□□□□□ -1.72
CAF16	P43569	KRE2	YDR483W	1329 nt		4.33	□□□□□ -1.72
CAF16	P43569	NSE4	YDL105W	1209 nt		4.33	□□□□□ -1.72
CAF16	P43569	CLB3	YDL155W	1284 nt		4.33	□□□□□ -1.72
CAF16	P43569	SPT3	YDR392W	1014 nt		4.33	□□□□□ -1.72
CAF16	P43569	YIP1	YGR172C	747 nt		4.33	□□□□□ -1.72
CAF16	P43569	RGI2	YIL057C	495 nt		4.33	□□□□□ -1.72
CAF16	P43569	RSM25	YIL093C	795 nt		4.33	□□□□□ -1.72
CAF16	P43569	MRPL49	YJL096W	486 nt		4.33	□□□□□ -1.72
CAF16	P43569	YJR087W	YJR087W	351 nt		4.33	□□□□□ -1.72
CAF16	P43569	TPK3	YKL166C	1197 nt		4.33	□□□□□ -1.72
CAF16	P43569	PET123	YOR158W	957 nt		4.33	□□□□□ -1.72
CAF16	P43569	RCN2	YOR220W	798 nt		4.33	□□□□□ -1.72
CAF16	P43569	PHO88	YBR106W	567 nt		4.33	□□□□□ -1.72
CAF16	P43569	GDE1	YPL110C	3672 nt		4.33	□□□□□ -1.72
CAF16	P43569	GSM1	YJL103C	1857 nt		4.32	□□□□□ -1.72
CAF16	P43569	MDM30	YLR368W	1797 nt		4.32	□□□□□ -1.72
CAF16	P43569	ALG6	YOR002W	1635 nt		4.32	□□□□□ -1.72
CAF16	P43569	PDR5	YOR153W	4536 nt		4.32	□□□□□ -1.72
CAF16	P43569	TRM82	YDR165W	1335 nt		4.32	□□□□□ -1.72
CAF16	P43569	UTP25	YIL091C	2166 nt		4.32	□□□□□ -1.72
CAF16	P43569	RVS161	YCR009C	798 nt		4.32	□□□□□ -1.72
CAF16	P43569	LRS4	YDR439W	1044 nt		4.32	□□□□□ -1.72
CAF16	P43569	ECM11	YDR446W	909 nt		4.32	□□□□□ -1.72
CAF16	P43569	RPL8A	YHL033C	771 nt		4.32	□□□□□ -1.72
CAF16	P43569	QCR10	YHR001W-A	234 nt		4.32	□□□□□ -1.72
CAF16	P43569	EGD2	YHR193C	525 nt		4.32	□□□□□ -1.72
CAF16	P43569	DAL3	YIR032C	588 nt		4.32	□□□□□ -1.72
CAF16	P43569	POP3	YNL282W	588 nt		4.32	□□□□□ -1.72
CAF16	P43569	ETR1	YBR026C	1143 nt		4.32	□□□□□ -1.72
CAF16	P43569	YBP2	YGL060W	1926 nt		4.32	□□□□□ -1.72

Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms