Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.56■■□□□ 1.2
PCK1P35558 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCK1P35558 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
PCK1P35558 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCK1P35558 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.56■■□□□ 1.2
PCK1P35558 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCK1P35558 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCK1P35558 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.55■■□□□ 1.2
PCK1P35558 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCK1P35558 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCK1P35558 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCK1P35558 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.55■■□□□ 1.2
PCK1P35558 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.55■■□□□ 1.2
PCK1P35558 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCK1P35558 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.55■■□□□ 1.2
PCK1P35558 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PCK1P35558 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCK1P35558 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCK1P35558 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCK1P35558 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCK1P35558 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PCK1P35558 AC096631.2-201ENST00000436136 790 ntBASIC22.54■■□□□ 1.2
PCK1P35558 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.54■■□□□ 1.2
PCK1P35558 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PCK1P35558 AC233992.3-201ENST00000607491 485 ntBASIC22.54■■□□□ 1.2
PCK1P35558 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCK1P35558 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCK1P35558 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.54■■□□□ 1.2
PCK1P35558 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.54■■□□□ 1.2
PCK1P35558 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCK1P35558 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.54■■□□□ 1.2
PCK1P35558 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCK1P35558 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.53■■□□□ 1.2
PCK1P35558 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCK1P35558 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PCK1P35558 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.53■■□□□ 1.2
PCK1P35558 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCK1P35558 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCK1P35558 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.53■■□□□ 1.2
PCK1P35558 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.53■■□□□ 1.2
PCK1P35558 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PCK1P35558 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.53■■□□□ 1.2
PCK1P35558 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
PCK1P35558 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCK1P35558 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCK1P35558 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCK1P35558 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCK1P35558 FAM99A-202ENST00000538190 1989 ntBASIC22.52■■□□□ 1.2
PCK1P35558 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCK1P35558 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCK1P35558 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCK1P35558 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCK1P35558 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.52■■□□□ 1.2
PCK1P35558 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.52■■□□□ 1.2
PCK1P35558 AC106739.1-201ENST00000617035 715 ntBASIC22.52■■□□□ 1.2
PCK1P35558 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCK1P35558 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCK1P35558 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCK1P35558 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.52■■□□□ 1.2
PCK1P35558 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.52■■□□□ 1.2
PCK1P35558 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCK1P35558 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
PCK1P35558 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
PCK1P35558 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.51■■□□□ 1.19
PCK1P35558 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCK1P35558 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCK1P35558 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.51■■□□□ 1.19
PCK1P35558 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCK1P35558 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCK1P35558 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.51■■□□□ 1.19
PCK1P35558 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.51■■□□□ 1.19
PCK1P35558 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCK1P35558 AC133561.4-201ENST00000566112 224 ntBASIC22.51■■□□□ 1.19
PCK1P35558 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCK1P35558 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCK1P35558 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCK1P35558 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCK1P35558 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.5■■□□□ 1.19
PCK1P35558 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
PCK1P35558 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCK1P35558 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCK1P35558 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PCK1P35558 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.5■■□□□ 1.19
PCK1P35558 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.5■■□□□ 1.19
PCK1P35558 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCK1P35558 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
PCK1P35558 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCK1P35558 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
PCK1P35558 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCK1P35558 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.49■■□□□ 1.19
PCK1P35558 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCK1P35558 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCK1P35558 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCK1P35558 PBX2P1-201ENST00000493219 1291 ntBASIC22.49■■□□□ 1.19
PCK1P35558 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.49■■□□□ 1.19
PCK1P35558 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCK1P35558 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.49■■□□□ 1.19
PCK1P35558 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCK1P35558 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCK1P35558 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms