Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.23■□□□□ 0.67
SDHAP31040 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.23■□□□□ 0.67
SDHAP31040 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SDHAP31040 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAP31040 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SDHAP31040 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAP31040 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAP31040 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.22■□□□□ 0.67
SDHAP31040 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.22■□□□□ 0.67
SDHAP31040 AC026471.6-201ENST00000622954 1905 ntBASIC19.22■□□□□ 0.67
SDHAP31040 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SDHAP31040 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAP31040 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.22■□□□□ 0.67
SDHAP31040 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAP31040 AP005435.1-201ENST00000529293 1178 ntBASIC19.22■□□□□ 0.67
SDHAP31040 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.22■□□□□ 0.67
SDHAP31040 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.22■□□□□ 0.67
SDHAP31040 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SDHAP31040 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAP31040 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SDHAP31040 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAP31040 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAP31040 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SDHAP31040 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
SDHAP31040 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAP31040 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.21■□□□□ 0.67
SDHAP31040 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SDHAP31040 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.21■□□□□ 0.67
SDHAP31040 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SDHAP31040 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHAP31040 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.21■□□□□ 0.67
SDHAP31040 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SDHAP31040 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SDHAP31040 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SDHAP31040 SLC47A1P1-202ENST00000449666 945 ntBASIC19.21■□□□□ 0.67
SDHAP31040 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.21■□□□□ 0.67
SDHAP31040 AC104564.3-201ENST00000582367 638 ntBASIC19.21■□□□□ 0.67
SDHAP31040 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.21■□□□□ 0.67
SDHAP31040 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
SDHAP31040 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SDHAP31040 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.21■□□□□ 0.67
SDHAP31040 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHAP31040 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHAP31040 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHAP31040 Z98882.1-201ENST00000622160 2253 ntBASIC19.21■□□□□ 0.67
SDHAP31040 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SDHAP31040 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAP31040 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAP31040 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.2■□□□□ 0.66
SDHAP31040 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAP31040 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SDHAP31040 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAP31040 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAP31040 AL034346.1-201ENST00000568244 1277 ntBASIC19.2■□□□□ 0.66
SDHAP31040 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.2■□□□□ 0.66
SDHAP31040 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SDHAP31040 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAP31040 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAP31040 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.2■□□□□ 0.66
SDHAP31040 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAP31040 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SDHAP31040 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHAP31040 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SDHAP31040 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.19■□□□□ 0.66
SDHAP31040 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.19■□□□□ 0.66
SDHAP31040 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.19■□□□□ 0.66
SDHAP31040 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHAP31040 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.19■□□□□ 0.66
SDHAP31040 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
SDHAP31040 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.18■□□□□ 0.66
SDHAP31040 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SDHAP31040 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAP31040 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
SDHAP31040 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAP31040 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAP31040 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAP31040 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SDHAP31040 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAP31040 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAP31040 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.18■□□□□ 0.66
SDHAP31040 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAP31040 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.18■□□□□ 0.66
SDHAP31040 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAP31040 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAP31040 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAP31040 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAP31040 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAP31040 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAP31040 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.18■□□□□ 0.66
SDHAP31040 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SDHAP31040 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.17■□□□□ 0.66
SDHAP31040 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SDHAP31040 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.17■□□□□ 0.66
SDHAP31040 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SDHAP31040 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDHAP31040 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SDHAP31040 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDHAP31040 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDHAP31040 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.17■□□□□ 0.66
SDHAP31040 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms