Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATF4P18848 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATF4P18848 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATF4P18848 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATF4P18848 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ATF4P18848 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.82■□□□□ 0.44
ATF4P18848 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.81■□□□□ 0.44
ATF4P18848 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ATF4P18848 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.81■□□□□ 0.44
ATF4P18848 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATF4P18848 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF4P18848 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF4P18848 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATF4P18848 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATF4P18848 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ATF4P18848 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
ATF4P18848 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATF4P18848 AL033527.3-201ENST00000566366 1196 ntBASIC17.81■□□□□ 0.44
ATF4P18848 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ATF4P18848 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF4P18848 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ATF4P18848 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATF4P18848 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
ATF4P18848 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATF4P18848 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF4P18848 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATF4P18848 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF4P18848 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATF4P18848 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.81■□□□□ 0.44
ATF4P18848 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ATF4P18848 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF4P18848 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF4P18848 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ATF4P18848 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.8■□□□□ 0.44
ATF4P18848 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.8■□□□□ 0.44
ATF4P18848 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF4P18848 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
ATF4P18848 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATF4P18848 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.8■□□□□ 0.44
ATF4P18848 AC004987.1-201ENST00000428627 508 ntBASIC17.8■□□□□ 0.44
ATF4P18848 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ATF4P18848 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
ATF4P18848 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.8■□□□□ 0.44
ATF4P18848 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF4P18848 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF4P18848 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.8■□□□□ 0.44
ATF4P18848 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATF4P18848 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF4P18848 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.8■□□□□ 0.44
ATF4P18848 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.8■□□□□ 0.44
ATF4P18848 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.8■□□□□ 0.44
ATF4P18848 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.8■□□□□ 0.44
ATF4P18848 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF4P18848 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF4P18848 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.8■□□□□ 0.44
ATF4P18848 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATF4P18848 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ATF4P18848 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF4P18848 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATF4P18848 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ATF4P18848 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF4P18848 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF4P18848 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF4P18848 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ATF4P18848 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATF4P18848 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF4P18848 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF4P18848 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF4P18848 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF4P18848 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ATF4P18848 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ATF4P18848 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.79■□□□□ 0.44
ATF4P18848 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF4P18848 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ATF4P18848 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
ATF4P18848 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.78■□□□□ 0.44
ATF4P18848 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.78■□□□□ 0.44
ATF4P18848 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ATF4P18848 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.78■□□□□ 0.44
ATF4P18848 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATF4P18848 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATF4P18848 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATF4P18848 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.78■□□□□ 0.44
ATF4P18848 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATF4P18848 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATF4P18848 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATF4P18848 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ATF4P18848 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATF4P18848 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATF4P18848 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATF4P18848 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATF4P18848 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ATF4P18848 AC133552.2-201ENST00000619106 1032 ntBASIC17.77■□□□□ 0.44
ATF4P18848 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATF4P18848 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATF4P18848 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATF4P18848 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
ATF4P18848 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ATF4P18848 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATF4P18848 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms