Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL4AP11441 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL4AP11441 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL4AP11441 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL4AP11441 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
UBL4AP11441 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.81■□□□□ 0.76
UBL4AP11441 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL4AP11441 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL4AP11441 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL4AP11441 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL4AP11441 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL4AP11441 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL4AP11441 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBL4AP11441 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBL4AP11441 IGHV3-19-201ENST00000521488 291 ntBASIC19.8■□□□□ 0.76
UBL4AP11441 AF213884.3-201ENST00000563833 479 ntBASIC19.8■□□□□ 0.76
UBL4AP11441 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBL4AP11441 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.8■□□□□ 0.76
UBL4AP11441 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
UBL4AP11441 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBL4AP11441 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
UBL4AP11441 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBL4AP11441 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBL4AP11441 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.79■□□□□ 0.76
UBL4AP11441 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBL4AP11441 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBL4AP11441 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBL4AP11441 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.79■□□□□ 0.76
UBL4AP11441 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.79■□□□□ 0.76
UBL4AP11441 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.79■□□□□ 0.76
UBL4AP11441 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.79■□□□□ 0.76
UBL4AP11441 AC133561.4-201ENST00000566112 224 ntBASIC19.79■□□□□ 0.76
UBL4AP11441 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.79■□□□□ 0.76
UBL4AP11441 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
UBL4AP11441 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBL4AP11441 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBL4AP11441 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBL4AP11441 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
UBL4AP11441 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.78■□□□□ 0.76
UBL4AP11441 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.78■□□□□ 0.76
UBL4AP11441 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBL4AP11441 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBL4AP11441 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBL4AP11441 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBL4AP11441 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBL4AP11441 MIR939-201ENST00000401314 82 ntBASIC19.78■□□□□ 0.76
UBL4AP11441 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBL4AP11441 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBL4AP11441 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
UBL4AP11441 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBL4AP11441 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBL4AP11441 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBL4AP11441 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBL4AP11441 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.78■□□□□ 0.76
UBL4AP11441 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.78■□□□□ 0.76
UBL4AP11441 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBL4AP11441 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBL4AP11441 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBL4AP11441 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.77■□□□□ 0.76
UBL4AP11441 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBL4AP11441 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.77■□□□□ 0.76
UBL4AP11441 AC091305.1-201ENST00000479476 895 ntBASIC19.77■□□□□ 0.76
UBL4AP11441 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.77■□□□□ 0.76
UBL4AP11441 AL031432.3-201ENST00000607698 485 ntBASIC19.77■□□□□ 0.76
UBL4AP11441 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.77■□□□□ 0.76
UBL4AP11441 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
UBL4AP11441 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
UBL4AP11441 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.76■□□□□ 0.75
UBL4AP11441 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBL4AP11441 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBL4AP11441 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBL4AP11441 RASA4CP-201ENST00000424092 1398 ntBASIC19.76■□□□□ 0.75
UBL4AP11441 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBL4AP11441 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
UBL4AP11441 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBL4AP11441 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
UBL4AP11441 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBL4AP11441 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.76■□□□□ 0.75
UBL4AP11441 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBL4AP11441 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBL4AP11441 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBL4AP11441 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBL4AP11441 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBL4AP11441 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBL4AP11441 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBL4AP11441 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBL4AP11441 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBL4AP11441 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.75■□□□□ 0.75
UBL4AP11441 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBL4AP11441 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBL4AP11441 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBL4AP11441 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBL4AP11441 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
UBL4AP11441 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
UBL4AP11441 LINC00565-201ENST00000562710 2331 ntBASIC19.75■□□□□ 0.75
UBL4AP11441 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
UBL4AP11441 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
UBL4AP11441 TSPY26P-201ENST00000476365 1326 ntBASIC19.75■□□□□ 0.75
UBL4AP11441 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBL4AP11441 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms