Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 FRE4YNR060W 2160 nt2.68□□□□□ -1.98
RPL40BP0CH09 SEC27YGL137W 2670 nt2.68□□□□□ -1.98
RPL40BP0CH09 ATP12YJL180C 978 nt2.68□□□□□ -1.98
RPL40BP0CH09 SFH1YLR321C 1281 nt2.68□□□□□ -1.98
RPL40BP0CH09 SAM37YMR060C 984 nt2.68□□□□□ -1.98
RPL40BP0CH09 DGA1YOR245C 1257 nt2.68□□□□□ -1.98
RPL40BP0CH09 INA17YPL099C 549 nt2.68□□□□□ -1.98
RPL40BP0CH09 FUN30YAL019W 3396 nt2.68□□□□□ -1.98
RPL40BP0CH09 RIF1YBR275C 5751 nt2.68□□□□□ -1.98
RPL40BP0CH09 COM2YER130C 1332 nt2.68□□□□□ -1.98
RPL40BP0CH09 RRM3YHR031C 2172 nt2.67□□□□□ -1.98
RPL40BP0CH09 VPS17YOR132W 1656 nt2.67□□□□□ -1.98
RPL40BP0CH09 VTC3YPL019C 2508 nt2.67□□□□□ -1.98
RPL40BP0CH09 MET5YJR137C 4329 nt2.67□□□□□ -1.98
RPL40BP0CH09 VAC17YCL063W 1272 nt2.67□□□□□ -1.98
RPL40BP0CH09 ERG26YGL001C 1050 nt2.67□□□□□ -1.98
RPL40BP0CH09 DSD1YGL196W 1287 nt2.67□□□□□ -1.98
RPL40BP0CH09 QCR10YHR001W-A 234 nt2.67□□□□□ -1.98
RPL40BP0CH09 REH1YLR387C 1299 nt2.67□□□□□ -1.98
RPL40BP0CH09 POC4YPL144W 447 nt2.67□□□□□ -1.98
RPL40BP0CH09 MRPL37YBR268W 318 nt2.67□□□□□ -1.98
RPL40BP0CH09 TCB2YNL087W 3537 nt2.67□□□□□ -1.98
RPL40BP0CH09 YPS6YIR039C 1614 nt2.67□□□□□ -1.98
RPL40BP0CH09 GCD6YDR211W 2139 nt2.66□□□□□ -1.98
RPL40BP0CH09 TDA3YHR009C 1572 nt2.66□□□□□ -1.98
RPL40BP0CH09 PMR1YGL167C 2853 nt2.66□□□□□ -1.98
RPL40BP0CH09 YIR040CYIR040C 333 nt2.66□□□□□ -1.98
RPL40BP0CH09 YLR036CYLR036C 612 nt2.66□□□□□ -1.98
RPL40BP0CH09 RPS0BYLR048W 759 nt2.66□□□□□ -1.98
RPL40BP0CH09 YML037CYML037C 1023 nt2.66□□□□□ -1.98
RPL40BP0CH09 YML053CYML053C 639 nt2.66□□□□□ -1.98
RPL40BP0CH09 KTI11YBL071W-A 249 nt2.66□□□□□ -1.98
RPL40BP0CH09 YHR078WYHR078W 1659 nt2.66□□□□□ -1.98
RPL40BP0CH09 FUN12YAL035W 3009 nt2.66□□□□□ -1.98
RPL40BP0CH09 TMA108YIL137C 2841 nt2.65□□□□□ -1.98
RPL40BP0CH09 FLO1YAR050W 4614 nt2.65□□□□□ -1.98
RPL40BP0CH09 PWP2YCR057C 2772 nt2.65□□□□□ -1.99
RPL40BP0CH09 NOP6YDL213C 678 nt2.65□□□□□ -1.99
RPL40BP0CH09 UBC1YDR177W 648 nt2.65□□□□□ -1.99
RPL40BP0CH09 DYN2YDR424C 279 nt2.65□□□□□ -1.99
RPL40BP0CH09 ANS1YHR126C 480 nt2.65□□□□□ -1.99
RPL40BP0CH09 YJL211CYJL211C 444 nt2.65□□□□□ -1.99
RPL40BP0CH09 PML1YLR016C 615 nt2.65□□□□□ -1.99
RPL40BP0CH09 DDI3YNL335W 678 nt2.65□□□□□ -1.99
RPL40BP0CH09 IZH2YOL002C 954 nt2.65□□□□□ -1.99
RPL40BP0CH09 TMC1YOR052C 453 nt2.65□□□□□ -1.99
RPL40BP0CH09 POL1YNL102W 4407 nt2.65□□□□□ -1.99
RPL40BP0CH09 ATG13YPR185W 2217 nt2.65□□□□□ -1.99
RPL40BP0CH09 FKS3YMR306W 5358 nt2.64□□□□□ -1.99
RPL40BP0CH09 ITC1YGL133W 3795 nt2.64□□□□□ -1.99
RPL40BP0CH09 MOT1YPL082C 5604 nt2.64□□□□□ -1.99
RPL40BP0CH09 SSQ1YLR369W 1974 nt2.64□□□□□ -1.99
RPL40BP0CH09 CLB3YDL155W 1284 nt2.64□□□□□ -1.99
RPL40BP0CH09 YER067C-AYER067C-A 324 nt2.64□□□□□ -1.99
RPL40BP0CH09 ARD1YHR013C 717 nt2.64□□□□□ -1.99
RPL40BP0CH09 YPL107WYPL107W 747 nt2.64□□□□□ -1.99
RPL40BP0CH09 RRD2YPL152W 1077 nt2.64□□□□□ -1.99
RPL40BP0CH09 INP52YNL106C 3552 nt2.64□□□□□ -1.99
RPL40BP0CH09 DHH1YDL160C 1521 nt2.63□□□□□ -1.99
RPL40BP0CH09 YLR345WYLR345W 1530 nt2.63□□□□□ -1.99
RPL40BP0CH09 TFC4YGR047C 3078 nt2.63□□□□□ -1.99
RPL40BP0CH09 YPL216WYPL216W 3309 nt2.63□□□□□ -1.99
RPL40BP0CH09 DBP7YKR024C 2229 nt2.63□□□□□ -1.99
RPL40BP0CH09 YGR011WYGR011W 327 nt2.63□□□□□ -1.99
RPL40BP0CH09 RSM25YIL093C 795 nt2.63□□□□□ -1.99
RPL40BP0CH09 PAU14YIL176C 363 nt2.63□□□□□ -1.99
RPL40BP0CH09 DAL2YIR029W 1032 nt2.63□□□□□ -1.99
RPL40BP0CH09 PAU1YJL223C 363 nt2.63□□□□□ -1.99
RPL40BP0CH09 PBA1YLR199C 831 nt2.63□□□□□ -1.99
RPL40BP0CH09 YOR277CYOR277C 309 nt2.63□□□□□ -1.99
RPL40BP0CH09 DIM1YPL266W 957 nt2.63□□□□□ -1.99
RPL40BP0CH09 YPR050CYPR050C 414 nt2.63□□□□□ -1.99
RPL40BP0CH09 SYT1YPR095C 3681 nt2.63□□□□□ -1.99
RPL40BP0CH09 NAT1YDL040C 2565 nt2.63□□□□□ -1.99
RPL40BP0CH09 ERG9YHR190W 1335 nt2.63□□□□□ -1.99
RPL40BP0CH09 BNA4YBL098W 1383 nt2.62□□□□□ -1.99
RPL40BP0CH09 TYR1YBR166C 1359 nt2.62□□□□□ -1.99
RPL40BP0CH09 ERG11YHR007C 1593 nt2.62□□□□□ -1.99
RPL40BP0CH09 TAO3YIL129C 7131 nt2.62□□□□□ -1.99
RPL40BP0CH09 RGP1YDR137W 1992 nt2.62□□□□□ -1.99
RPL40BP0CH09 MIX14YDR031W 366 nt2.62□□□□□ -1.99
RPL40BP0CH09 PEF1YGR058W 1008 nt2.62□□□□□ -1.99
RPL40BP0CH09 YHL005CYHL005C 393 nt2.62□□□□□ -1.99
RPL40BP0CH09 SDH3YKL141W 597 nt2.62□□□□□ -1.99
RPL40BP0CH09 EMC6YLL014W 327 nt2.62□□□□□ -1.99
RPL40BP0CH09 RPS28BYLR264W 204 nt2.62□□□□□ -1.99
RPL40BP0CH09 ELO3YLR372W 1038 nt2.62□□□□□ -1.99
RPL40BP0CH09 RPC19YNL113W 429 nt2.62□□□□□ -1.99
RPL40BP0CH09 GCV2YMR189W 3105 nt2.62□□□□□ -1.99
RPL40BP0CH09 MDM1YML104C 3384 nt2.62□□□□□ -1.99
RPL40BP0CH09 HEH2YDR458C 1992 nt2.61□□□□□ -1.99
RPL40BP0CH09 DYN1YKR054C 12279 nt2.61□□□□□ -1.99
RPL40BP0CH09 COG3YER157W 2406 nt2.61□□□□□ -1.99
RPL40BP0CH09 CEP3YMR168C 1827 nt2.61□□□□□ -1.99
RPL40BP0CH09 NAM9YNL137C 1461 nt2.61□□□□□ -1.99
RPL40BP0CH09 YER085CYER085C 522 nt2.61□□□□□ -1.99
RPL40BP0CH09 FMP48YGR052W 1110 nt2.61□□□□□ -1.99
RPL40BP0CH09 YLR339CYLR339C 552 nt2.61□□□□□ -1.99
RPL40BP0CH09 SRT1YMR101C 1032 nt2.61□□□□□ -1.99
RPL40BP0CH09 REC114YMR133W 1287 nt2.61□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms