Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 FRE4YNR060W 2160 nt2.68□□□□□ -1.98
RPL40AP0CH08 SEC27YGL137W 2670 nt2.68□□□□□ -1.98
RPL40AP0CH08 ATP12YJL180C 978 nt2.68□□□□□ -1.98
RPL40AP0CH08 SFH1YLR321C 1281 nt2.68□□□□□ -1.98
RPL40AP0CH08 SAM37YMR060C 984 nt2.68□□□□□ -1.98
RPL40AP0CH08 DGA1YOR245C 1257 nt2.68□□□□□ -1.98
RPL40AP0CH08 INA17YPL099C 549 nt2.68□□□□□ -1.98
RPL40AP0CH08 FUN30YAL019W 3396 nt2.68□□□□□ -1.98
RPL40AP0CH08 RIF1YBR275C 5751 nt2.68□□□□□ -1.98
RPL40AP0CH08 COM2YER130C 1332 nt2.68□□□□□ -1.98
RPL40AP0CH08 RRM3YHR031C 2172 nt2.67□□□□□ -1.98
RPL40AP0CH08 VPS17YOR132W 1656 nt2.67□□□□□ -1.98
RPL40AP0CH08 VTC3YPL019C 2508 nt2.67□□□□□ -1.98
RPL40AP0CH08 MET5YJR137C 4329 nt2.67□□□□□ -1.98
RPL40AP0CH08 VAC17YCL063W 1272 nt2.67□□□□□ -1.98
RPL40AP0CH08 ERG26YGL001C 1050 nt2.67□□□□□ -1.98
RPL40AP0CH08 DSD1YGL196W 1287 nt2.67□□□□□ -1.98
RPL40AP0CH08 QCR10YHR001W-A 234 nt2.67□□□□□ -1.98
RPL40AP0CH08 REH1YLR387C 1299 nt2.67□□□□□ -1.98
RPL40AP0CH08 POC4YPL144W 447 nt2.67□□□□□ -1.98
RPL40AP0CH08 MRPL37YBR268W 318 nt2.67□□□□□ -1.98
RPL40AP0CH08 TCB2YNL087W 3537 nt2.67□□□□□ -1.98
RPL40AP0CH08 YPS6YIR039C 1614 nt2.67□□□□□ -1.98
RPL40AP0CH08 GCD6YDR211W 2139 nt2.66□□□□□ -1.98
RPL40AP0CH08 TDA3YHR009C 1572 nt2.66□□□□□ -1.98
RPL40AP0CH08 PMR1YGL167C 2853 nt2.66□□□□□ -1.98
RPL40AP0CH08 YIR040CYIR040C 333 nt2.66□□□□□ -1.98
RPL40AP0CH08 YLR036CYLR036C 612 nt2.66□□□□□ -1.98
RPL40AP0CH08 RPS0BYLR048W 759 nt2.66□□□□□ -1.98
RPL40AP0CH08 YML037CYML037C 1023 nt2.66□□□□□ -1.98
RPL40AP0CH08 YML053CYML053C 639 nt2.66□□□□□ -1.98
RPL40AP0CH08 KTI11YBL071W-A 249 nt2.66□□□□□ -1.98
RPL40AP0CH08 YHR078WYHR078W 1659 nt2.66□□□□□ -1.98
RPL40AP0CH08 FUN12YAL035W 3009 nt2.66□□□□□ -1.98
RPL40AP0CH08 TMA108YIL137C 2841 nt2.65□□□□□ -1.98
RPL40AP0CH08 FLO1YAR050W 4614 nt2.65□□□□□ -1.98
RPL40AP0CH08 PWP2YCR057C 2772 nt2.65□□□□□ -1.99
RPL40AP0CH08 NOP6YDL213C 678 nt2.65□□□□□ -1.99
RPL40AP0CH08 UBC1YDR177W 648 nt2.65□□□□□ -1.99
RPL40AP0CH08 DYN2YDR424C 279 nt2.65□□□□□ -1.99
RPL40AP0CH08 ANS1YHR126C 480 nt2.65□□□□□ -1.99
RPL40AP0CH08 YJL211CYJL211C 444 nt2.65□□□□□ -1.99
RPL40AP0CH08 PML1YLR016C 615 nt2.65□□□□□ -1.99
RPL40AP0CH08 DDI3YNL335W 678 nt2.65□□□□□ -1.99
RPL40AP0CH08 IZH2YOL002C 954 nt2.65□□□□□ -1.99
RPL40AP0CH08 TMC1YOR052C 453 nt2.65□□□□□ -1.99
RPL40AP0CH08 POL1YNL102W 4407 nt2.65□□□□□ -1.99
RPL40AP0CH08 ATG13YPR185W 2217 nt2.65□□□□□ -1.99
RPL40AP0CH08 FKS3YMR306W 5358 nt2.64□□□□□ -1.99
RPL40AP0CH08 ITC1YGL133W 3795 nt2.64□□□□□ -1.99
RPL40AP0CH08 MOT1YPL082C 5604 nt2.64□□□□□ -1.99
RPL40AP0CH08 SSQ1YLR369W 1974 nt2.64□□□□□ -1.99
RPL40AP0CH08 CLB3YDL155W 1284 nt2.64□□□□□ -1.99
RPL40AP0CH08 YER067C-AYER067C-A 324 nt2.64□□□□□ -1.99
RPL40AP0CH08 ARD1YHR013C 717 nt2.64□□□□□ -1.99
RPL40AP0CH08 YPL107WYPL107W 747 nt2.64□□□□□ -1.99
RPL40AP0CH08 RRD2YPL152W 1077 nt2.64□□□□□ -1.99
RPL40AP0CH08 INP52YNL106C 3552 nt2.64□□□□□ -1.99
RPL40AP0CH08 DHH1YDL160C 1521 nt2.63□□□□□ -1.99
RPL40AP0CH08 YLR345WYLR345W 1530 nt2.63□□□□□ -1.99
RPL40AP0CH08 TFC4YGR047C 3078 nt2.63□□□□□ -1.99
RPL40AP0CH08 YPL216WYPL216W 3309 nt2.63□□□□□ -1.99
RPL40AP0CH08 DBP7YKR024C 2229 nt2.63□□□□□ -1.99
RPL40AP0CH08 YGR011WYGR011W 327 nt2.63□□□□□ -1.99
RPL40AP0CH08 RSM25YIL093C 795 nt2.63□□□□□ -1.99
RPL40AP0CH08 PAU14YIL176C 363 nt2.63□□□□□ -1.99
RPL40AP0CH08 DAL2YIR029W 1032 nt2.63□□□□□ -1.99
RPL40AP0CH08 PAU1YJL223C 363 nt2.63□□□□□ -1.99
RPL40AP0CH08 PBA1YLR199C 831 nt2.63□□□□□ -1.99
RPL40AP0CH08 YOR277CYOR277C 309 nt2.63□□□□□ -1.99
RPL40AP0CH08 DIM1YPL266W 957 nt2.63□□□□□ -1.99
RPL40AP0CH08 YPR050CYPR050C 414 nt2.63□□□□□ -1.99
RPL40AP0CH08 SYT1YPR095C 3681 nt2.63□□□□□ -1.99
RPL40AP0CH08 NAT1YDL040C 2565 nt2.63□□□□□ -1.99
RPL40AP0CH08 ERG9YHR190W 1335 nt2.63□□□□□ -1.99
RPL40AP0CH08 BNA4YBL098W 1383 nt2.62□□□□□ -1.99
RPL40AP0CH08 TYR1YBR166C 1359 nt2.62□□□□□ -1.99
RPL40AP0CH08 ERG11YHR007C 1593 nt2.62□□□□□ -1.99
RPL40AP0CH08 TAO3YIL129C 7131 nt2.62□□□□□ -1.99
RPL40AP0CH08 RGP1YDR137W 1992 nt2.62□□□□□ -1.99
RPL40AP0CH08 MIX14YDR031W 366 nt2.62□□□□□ -1.99
RPL40AP0CH08 PEF1YGR058W 1008 nt2.62□□□□□ -1.99
RPL40AP0CH08 YHL005CYHL005C 393 nt2.62□□□□□ -1.99
RPL40AP0CH08 SDH3YKL141W 597 nt2.62□□□□□ -1.99
RPL40AP0CH08 EMC6YLL014W 327 nt2.62□□□□□ -1.99
RPL40AP0CH08 RPS28BYLR264W 204 nt2.62□□□□□ -1.99
RPL40AP0CH08 ELO3YLR372W 1038 nt2.62□□□□□ -1.99
RPL40AP0CH08 RPC19YNL113W 429 nt2.62□□□□□ -1.99
RPL40AP0CH08 GCV2YMR189W 3105 nt2.62□□□□□ -1.99
RPL40AP0CH08 MDM1YML104C 3384 nt2.62□□□□□ -1.99
RPL40AP0CH08 HEH2YDR458C 1992 nt2.61□□□□□ -1.99
RPL40AP0CH08 DYN1YKR054C 12279 nt2.61□□□□□ -1.99
RPL40AP0CH08 COG3YER157W 2406 nt2.61□□□□□ -1.99
RPL40AP0CH08 CEP3YMR168C 1827 nt2.61□□□□□ -1.99
RPL40AP0CH08 NAM9YNL137C 1461 nt2.61□□□□□ -1.99
RPL40AP0CH08 YER085CYER085C 522 nt2.61□□□□□ -1.99
RPL40AP0CH08 FMP48YGR052W 1110 nt2.61□□□□□ -1.99
RPL40AP0CH08 YLR339CYLR339C 552 nt2.61□□□□□ -1.99
RPL40AP0CH08 SRT1YMR101C 1032 nt2.61□□□□□ -1.99
RPL40AP0CH08 REC114YMR133W 1287 nt2.61□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 26 ms