Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
UBCP0CG48 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBCP0CG48 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBCP0CG48 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
UBCP0CG48 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBCP0CG48 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.78■□□□□ 0.6
UBCP0CG48 AC006455.2-201ENST00000429931 906 ntBASIC18.78■□□□□ 0.6
UBCP0CG48 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.78■□□□□ 0.6
UBCP0CG48 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.78■□□□□ 0.6
UBCP0CG48 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.78■□□□□ 0.6
UBCP0CG48 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBCP0CG48 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBCP0CG48 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBCP0CG48 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBCP0CG48 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.78■□□□□ 0.6
UBCP0CG48 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBCP0CG48 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.78■□□□□ 0.6
UBCP0CG48 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.77■□□□□ 0.6
UBCP0CG48 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
UBCP0CG48 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBCP0CG48 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
UBCP0CG48 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.6
UBCP0CG48 AL356740.2-201ENST00000601559 647 ntBASIC18.77■□□□□ 0.6
UBCP0CG48 AC087239.1-201ENST00000622671 572 ntBASIC18.77■□□□□ 0.6
UBCP0CG48 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.77■□□□□ 0.6
UBCP0CG48 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
UBCP0CG48 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBCP0CG48 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBCP0CG48 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
UBCP0CG48 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBCP0CG48 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBCP0CG48 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
UBCP0CG48 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBCP0CG48 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.76■□□□□ 0.59
UBCP0CG48 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBCP0CG48 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBCP0CG48 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBCP0CG48 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
UBCP0CG48 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
UBCP0CG48 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UBCP0CG48 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.76■□□□□ 0.59
UBCP0CG48 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.76■□□□□ 0.59
UBCP0CG48 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.76■□□□□ 0.59
UBCP0CG48 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.76■□□□□ 0.59
UBCP0CG48 AC099791.2-201ENST00000605725 427 ntBASIC18.76■□□□□ 0.59
UBCP0CG48 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.76■□□□□ 0.59
UBCP0CG48 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBCP0CG48 Z98882.1-201ENST00000622160 2253 ntBASIC18.76■□□□□ 0.59
UBCP0CG48 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.76■□□□□ 0.59
UBCP0CG48 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.76■□□□□ 0.59
UBCP0CG48 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.76■□□□□ 0.59
UBCP0CG48 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBCP0CG48 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBCP0CG48 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.75■□□□□ 0.59
UBCP0CG48 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.75■□□□□ 0.59
UBCP0CG48 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
UBCP0CG48 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
UBCP0CG48 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
UBCP0CG48 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
UBCP0CG48 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBCP0CG48 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBCP0CG48 OR2I1P-207ENST00000453522 948 ntBASIC18.75■□□□□ 0.59
UBCP0CG48 AC092171.4-201ENST00000609130 632 ntBASIC18.75■□□□□ 0.59
UBCP0CG48 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBCP0CG48 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBCP0CG48 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
UBCP0CG48 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
UBCP0CG48 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
UBCP0CG48 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.74■□□□□ 0.59
UBCP0CG48 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.74■□□□□ 0.59
UBCP0CG48 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
UBCP0CG48 AC104564.3-201ENST00000582367 638 ntBASIC18.74■□□□□ 0.59
UBCP0CG48 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.74■□□□□ 0.59
UBCP0CG48 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
UBCP0CG48 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.74■□□□□ 0.59
UBCP0CG48 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBCP0CG48 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBCP0CG48 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBCP0CG48 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBCP0CG48 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBCP0CG48 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
UBCP0CG48 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBCP0CG48 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBCP0CG48 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.73■□□□□ 0.59
UBCP0CG48 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBCP0CG48 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.73■□□□□ 0.59
UBCP0CG48 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.73■□□□□ 0.59
UBCP0CG48 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.73■□□□□ 0.59
UBCP0CG48 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBCP0CG48 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBCP0CG48 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBCP0CG48 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBCP0CG48 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBCP0CG48 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.72■□□□□ 0.59
UBCP0CG48 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBCP0CG48 MIR3181-201ENST00000578512 73 ntBASIC18.72■□□□□ 0.59
UBCP0CG48 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.72■□□□□ 0.59
UBCP0CG48 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.72■□□□□ 0.59
UBCP0CG48 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
UBCP0CG48 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms