Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.67■□□□□ 0.9
CCNYL3P0C7X3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCNYL3P0C7X3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.67■□□□□ 0.9
CCNYL3P0C7X3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 AC016769.1-201ENST00000409132 1010 ntBASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCNYL3P0C7X3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNYL3P0C7X3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNYL3P0C7X3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.65■□□□□ 0.9
CCNYL3P0C7X3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNYL3P0C7X3 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.65■□□□□ 0.9
CCNYL3P0C7X3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.65■□□□□ 0.9
CCNYL3P0C7X3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.65■□□□□ 0.9
CCNYL3P0C7X3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.65■□□□□ 0.9
CCNYL3P0C7X3 TPRG1LP1-201ENST00000598702 760 ntBASIC20.65■□□□□ 0.9
CCNYL3P0C7X3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNYL3P0C7X3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCNYL3P0C7X3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCNYL3P0C7X3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCNYL3P0C7X3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCNYL3P0C7X3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCNYL3P0C7X3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CCNYL3P0C7X3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CCNYL3P0C7X3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.64■□□□□ 0.89
CCNYL3P0C7X3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCNYL3P0C7X3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCNYL3P0C7X3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCNYL3P0C7X3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCNYL3P0C7X3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.64■□□□□ 0.89
CCNYL3P0C7X3 AC137761.2-201ENST00000561729 223 ntBASIC20.64■□□□□ 0.89
CCNYL3P0C7X3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.64■□□□□ 0.89
CCNYL3P0C7X3 AC145350.3-201ENST00000569033 163 ntBASIC20.64■□□□□ 0.89
CCNYL3P0C7X3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCNYL3P0C7X3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCNYL3P0C7X3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCNYL3P0C7X3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCNYL3P0C7X3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCNYL3P0C7X3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCNYL3P0C7X3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.63■□□□□ 0.89
CCNYL3P0C7X3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCNYL3P0C7X3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.63■□□□□ 0.89
CCNYL3P0C7X3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.63■□□□□ 0.89
CCNYL3P0C7X3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCNYL3P0C7X3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.63■□□□□ 0.89
CCNYL3P0C7X3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.63■□□□□ 0.89
CCNYL3P0C7X3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.63■□□□□ 0.89
CCNYL3P0C7X3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.63■□□□□ 0.89
CCNYL3P0C7X3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCNYL3P0C7X3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCNYL3P0C7X3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCNYL3P0C7X3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCNYL3P0C7X3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 SMUG1P1-201ENST00000590640 811 ntBASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 OXCT2P1-201ENST00000447263 1535 ntBASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCNYL3P0C7X3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCNYL3P0C7X3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CCNYL3P0C7X3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.61■□□□□ 0.89
CCNYL3P0C7X3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.61■□□□□ 0.89
CCNYL3P0C7X3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCNYL3P0C7X3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCNYL3P0C7X3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCNYL3P0C7X3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.61■□□□□ 0.89
CCNYL3P0C7X3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCNYL3P0C7X3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.61■□□□□ 0.89
CCNYL3P0C7X3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCNYL3P0C7X3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCNYL3P0C7X3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNYL3P0C7X3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms